java.lang.Object

net.simplace.sim.model.FWSimComponent

net.simplace.sim.components.soil.soilcn.SoilCN

All Implemented Interfaces:: net.simplace.sim.util.FWSimFieldContainer

Direct Known Subclasses:: SoilCNP

public class SoilCN extends net.simplace.sim.model.FWSimComponent

Calculates turnover processes of soil organic carbon and nitrogen in multiple storage pools in multi-layered soil profiles

The routines for this SimComponent are taken from Corbeels et al 2004..

References:

Corbeels, M., McMurtrie, R.E., Pepper, D.A., O'Connell, A.M., 2005. A process-based model of nitrogen cycling in forest plantations Part I. Structure, calibration and analysis of the decomposition model. Ecol. Model. 187, 426-448.

Author:: Gunther Krauss, Andreas Enders, Thomas Gaiser

Component Variables

Content Type	Name	Description	Data Type	Unit	Min Value	Max Value	Default Value
constant	cAmmonia	Part of amonia in soil	DOUBLEARRAY	milligram_per_kilogram	-	-	-
constant	cArea	Area	DOUBLE	m2	0.0	1.0E8	1.0
constant	cBactnc	N:C ratio of the microbial for conditions in favour of a majority of bacteria	DOUBLE	g/g	0.125	0.2	0.2
constant	cBotDepth	Bottom depth of each layer	DOUBLEARRAY	m	-	-	-
constant	cBrabove	Part of branch pool going to surface litter (no considering coarse roots - normal + ly measured	DOUBLE	g/g	0.0	1.0	0.0
constant	cBranchsurfC	initial Amount of carbon in the ranch pool in surface litter	DOUBLE	kg/ha	0.0	999999.0	0.0
constant	cBranchsurfN	initial Amount of nitrogen in the ranch pool in surface litter	DOUBLE	kg/ha	0.0	999999.0	0.0
constant	cBulkDensity	Bulk density of soil	DOUBLEARRAY	g/cm3	-	-	-
constant	cCarbonInHumus	Carbon in humus	DOUBLEARRAY	kg/ha	-	-	-
constant	cCelloseSurfC	initial Amount of carbon in the cellulose like pool of the surface litter	DOUBLE	kg/ha	0.0	999999.0	0.0
constant	cCellosesoilC	initial Amount of carbon in the cellulosic pool of belowground litter	DOUBLEARRAY	kg/ha	-	-	-
constant	cCellosesoilN	initial Amount of nitrogen in the cellulosic pool of belowground litter	DOUBLEARRAY	kg/ha	-	-	-
constant	cCellosesurfN	initial Amount of nitrogen in the cellulose like pool of the surface litter	DOUBLE	kg/ha	0.0	999999.0	0.0
constant	cCelroot	Cellulose ratio of the root pool	DOUBLE	g/g	0.0	1.0	0.3
constant	cCelshoot	Cellulose ratio of the shoot pool	DOUBLE	g/g	0.0	1.0	0.3
constant	cClay	Part of clay in soil	DOUBLEARRAY	g/hg	-	-	-
constant	cCritinflow	Litter quality ratio below which n:c ratio of the microbial biomass responsible of its decomposition decreases	DOUBLE	g/g	0.1	0.9	0.5
constant	cDeadBiomassCRatio	C ratio of the dead leaves/roots biomass	DOUBLE	g/g	0.0	1.0	0.5
constant	cDeadBiomassNCRatio	N:C ratio of the dead leaves/roots biomass	DOUBLE	g/g	0.0	1.0	0.05
constant	cFmicrolab	Fraction of labile microbes (interacts with the decomposition rates of labile and + resistant fraction of the microbial pool	DOUBLE	g/g	0.1	0.9	0.7
constant	cFracNH4Volat	Fraction of NH4 fertilization lost by volatilization	DOUBLE	1	0.0	0.9	0.2
constant	cFungnc	N:C ratio of the microbial for conditions in favour of a majority of fungi	DOUBLE	g/g	0.07	0.1	0.08333
constant	cKdecomp1	Decomposition rates of the metabolic pool of surface litter	DOUBLEARRAY	d-1	-	-	-
constant	cKdecomp10	Decomposition rates of the labile microbial biomass pool	DOUBLEARRAY	d-1	-	-	-
constant	cKdecomp11	Decomposition rates of the resistant microbial biomass pools	DOUBLEARRAY	d-1	-	-	-
constant	cKdecomp12	Decomposition rates of the young SOM pool	DOUBLEARRAY	d-1	-	-	-
constant	cKdecomp13	Decomposition rates of the old SOM pool	DOUBLEARRAY	d-1	-	-	-
constant	cKdecomp2	Decomposition rates of the metabolic pool of soil litter	DOUBLEARRAY	d-1	-	-	-
constant	cKdecomp3	Decomposition rates of the cellulotic pool of surface litter	DOUBLEARRAY	d-1	-	-	-
constant	cKdecomp4	Decomposition rates of the cellulotic pool of soil litter	DOUBLEARRAY	d-1	-	-	-
constant	cKdecomp5	Decomposition rates of the ligno-cellulotic pool of surface litter	DOUBLEARRAY	d-1	-	-	-
constant	cKdecomp6	Decomposition rates of the ligno-cellulotic pool of soil litter	DOUBLEARRAY	d-1	-	-	-
constant	cLi	Lignin effect on decomposition of the ligno-cellulose pool	DOUBLE	1	1.0	4.0	2.0
constant	cLigbranch	Lignin ratio of the branch pool (normally measured value)	DOUBLE	g/g	0.0	1.0	0.5
constant	cLigncellosesoilC	initial Amount of carbon in the lignocellulosic pool of belowgroung litter	DOUBLEARRAY	kg/ha	-	-	-
constant	cLigncellosesoilN	initial Amount of nitrogen in the lignocellulosic pool of belowgroung litter	DOUBLEARRAY	kg/ha	-	-	-
constant	cLigncellosesurfC	initial Amount of carbon in the lignocellulosic pool of the surface litter	DOUBLE	kg/ha	0.0	999999.0	0.0
constant	cLigncellosesurfN	initial Amount of nitrogen in the lignocellulosic pool of the surface litter	DOUBLE	kg/ha	0.0	999999.0	0.0
constant	cLigncmax	maximal n:c ratio of the slow pool (at Ninorgcrit and more)	DOUBLE	g/g	0.0	999999.0	0.0
constant	cLigncmin	minimal n:c ratio of the slow pool	DOUBLE	g/g	0.005	0.013	0.013
constant	cLignfct	Lignine/lignocellulose (default value Melillo et al, 1989)	DOUBLE	g/g	0.5	0.8	0.7
constant	cLigroot	Lignin ratio of the root pool (normally measured value)	DOUBLE	g/g	0.0	1.0	0.3
constant	cLigshoot	Lignin ratio of the shoot pool (normally measured value)	DOUBLE	g/g	0.0	1.0	0.3
constant	cLigstem	Lignin ratio of the stem pool (normally measured value)	DOUBLE	g/g	0.0	1.0	0.5
constant	cMetabsoilC	initial Amount of carbon in the metabolic pool of belowground litter	DOUBLEARRAY	kg/ha	-	-	-
constant	cMetabsoilN	initial Amount of nitrogen in the metabolic pool of belowground litter	DOUBLEARRAY	kg/ha	-	-	-
constant	cMetabsurfC	initial Amount of carbon in the metabolic pool of aboveground litter	DOUBLE	kg/ha	0.0	999999.0	0.0
constant	cMetabsurfN	initial Amount of nitrogen in the metabolic pool of aboveground litter	DOUBLE	kg/ha	0.0	999999.0	0.0
constant	cMineralisationDepth	depth to which mineralisation occurs	DOUBLE	m	0.0	1.0E8	0.3
constant	cMinncact	-	DOUBLE	1	0.0	999999.0	0.0
constant	cNcsommicro	N:C ratio of the indigenous microbial biomass	DOUBLE	g/g	0.1	0.125	0.125
constant	cNinorgcrit	Critical inorganic nitrogen content below which n:c ratio of the slow pool decreases	DOUBLE	kg/ha	0.0	999999.0	0.0
constant	cNitrate	Part of nitrate in soil	DOUBLEARRAY	milligram_per_kilogram	-	-	-
constant	cOldSOMCN	CN ratio in the initial old soil organic matter pool	DOUBLE	1	0.0	30.0	10.0
constant	cOrganicCToMetabsoilCFraction	Fraction of organic C that goes to first layer of Metabsoil	DOUBLE	g/g	0.0	1.0	0.5
constant	cOrganicCarbon	Part of clay in soil	DOUBLEARRAY	g/hg	-	-	-
constant	cOrganicMatter_InitialSplitting	-	CHAR	1	-	-
constant	cOrganicNToMetabsoilNFraction	Fraction of organic C that goes to first layer of Metabsoil	DOUBLE	g/g	0.0	1.0	0.5
constant	cRatemicrobup	Inorganic nitrogen uptake by microbial biomass	DOUBLEARRAY	d-1	-	-	-
constant	cRootsoilC	initial Amount of carbon in the root pool in belowground litter	DOUBLEARRAY	kg/ha	-	-	-
constant	cRootsoilN	initial Amount of nitrogen in the root pool in belowground litter	DOUBLEARRAY	kg/ha	-	-	-
constant	cSOMStabilisationByTexture	SOM stabilisation by texture coefficient	DOUBLE	m2	0.0	1.0	0.75
constant	cSand	Part of silt in soil	DOUBLEARRAY	g/hg	-	-	-
constant	cSoilFieldCapacity	Field Capacity	DOUBLEARRAY	m3/m3	-	-	-
constant	cSoilWiltingPoint	Wilting Point	DOUBLEARRAY	m3/m3	-	-	-
constant	cStemsurfC	initial Amount of carbon in the stem pool in surface litter	DOUBLE	kg/ha	0.0	999999.0	0.0
constant	cStemsurfN	initial Amount of nitrogen in the stem pool in surface litter	DOUBLE	kg/ha	0.0	999999.0	0.0
constant	cTimeDiv	Time step divider	DOUBLE	1	0.0	999999.0	1.0
constant	cWatactype	1 or 2 ; 2 => the Paul formalism is choosen (Paul et al, 2000)	INT	1	-	-	2
constant	cWaterEffectSwitch	-	CHAR	1	-	-
constant	cYmin	Minimum microbial efficiency from reduction because of a lack of inorganic nitrog + en	DOUBLEARRAY	1	-	-	-
constant	cYoungSOMCN	CN ratio in the initial young soil organic matter pool	DOUBLE	1	0.0	30.0	12.0
constant	cmicroLabCN	CN ratio in the initial labile microbs pool	DOUBLE	1	0.0	20.0	8.0
constant	cmicroLabFrac	Labile microbs fraction in initial soil organic carbon	DOUBLE	1	0.0	0.1	0.015
constant	cmicroRstCN	CN ratio in the initial resistant microbs pool	DOUBLE	1	0.0	20.0	8.0
constant	cmicroRstFrac	Resistant microbs fraction in initial soil organic carbon	DOUBLE	1	0.0	0.1	0.015
input	iDeadLeaves	Dead leaves biomass rate	DOUBLE	g/m2	0.0	1.0E8	0.0
input	iDeadLeavesC	Dead leaves carbon rate	DOUBLE	g/m2	0.0	1.0E8	-
input	iDeadLeavesN	Dead leaves nitrogen rate	DOUBLE	g/m2	0.0	1.0E8	-
input	iDeadRoots	Dead roots biomass rate	DOUBLEARRAY	g/m2	-	-	-
input	iDeadRootsC	Dead roots carbon rate	DOUBLEARRAY	g/m2	-	-	-
input	iDeadRootsN	Dead roots nitrogen rate	DOUBLEARRAY	g/m2	-	-	-
input	iDeadStems	Dead stems biomass rate	DOUBLE	g/m2	0.0	1.0E8	0.0
input	iDeadStemsC	Dead stems carbon rate	DOUBLE	g/m2	0.0	1.0E8	-
input	iDeadStemsN	Dead stems nitrogen rate	DOUBLE	g/m2	0.0	1.0E8	-
input	iDoInitialize	When true resets whole component to initial states	BOOLEAN	1	-	-	false
input	iFertilizerOrganicC	Organic C from fertilizer application (manure)	DOUBLE	g/m2	0.0	1.0E8	0.0
input	iFertilizerOrganicN	Organic N from fertilizer application (manure)	DOUBLE	g/m2	0.0	1.0E8	0.0
input	iNinorg	inorganic N	DOUBLEARRAY	g/m2	-	-	-
input	iSoilTemp	Soil Temperature	DOUBLEARRAY	°C	-	-	-
input	iSoilWC	Soil water content	DOUBLEARRAY	mm	-	-	-
state	sBotDepth	Bottom depth of each layer	DOUBLEARRAY	m	-	-	-
state	sBranchsurfC	Amount of carbon in the ranch pool in surface litter	DOUBLE	kg/ha	0.0	999999.0	0.0
state	sBranchsurfN	Amount of nitrogen in the ranch pool in surface litter	DOUBLE	kg/ha	0.0	999999.0	0.0
state	sBypassForNitrogen	a percentage of water that does not effectively contributes to mixing cell for ni + trate	DOUBLEARRAY	%	-	-	-
state	sCNSoil	C:N ratio of soil	DOUBLEARRAY	g/g	-	-	-
state	sCascadingIsUsed	CascadingIsUsed	BOOLEAN	1	-	-	true
state	sCellosesoilC	Amount of carbon in the cellulosic pool of belowground litter	DOUBLEARRAY	kg/ha	0.0	999999.0	-
state	sCellosesoilN	Amount of nitrogen in the cellulosic pool of belowground litter	DOUBLEARRAY	kg/ha	0.0	999999.0	-
state	sCellosesurfC	Amount of carbon in the cellulose like pool of the surface litter	DOUBLE	kg/ha	0.0	999999.0	-
state	sCellosesurfN	Amount of nitrogen in the cellulose like pool of the surface litter	DOUBLE	kg/ha	0.0	999999.0	-
state	sClay	Part of clay in soil	DOUBLEARRAY	g/g	-	-	-
state	sCurrentDay	Current day in the simulation	INT	day in the year	0	366	0
state	sFinesoil	Part of fine soil (Clay+Silt)	DOUBLEARRAY	1	-	-	-
state	sLayThick	Layer Thickness	DOUBLEARRAY	m	-	-	-
state	sLigncellosesoilC	Amount of carbon in the lignocellulosic pool of belowgroung litter	DOUBLEARRAY	kg/ha	0.0	999999.0	-
state	sLigncellosesoilN	Amount of nitrogen in the lignocellulosic pool of belowgroung litter	DOUBLEARRAY	kg/ha	0.0	999999.0	-
state	sLigncellosesurfC	Amount of carbon in the lignocellulosic pool of the surface litter	DOUBLE	kg/ha	0.0	999999.0	-
state	sLigncellosesurfN	Amount of nitrogen in the lignocellulosic pool of the surface litter	DOUBLE	kg/ha	0.0	999999.0	-
state	sLignfctr	Lignin fraction of root compartment	DOUBLE	1	0.0	1.0	0.3
state	sLignfcts	Lignin fraction of shoot compartment	DOUBLE	1	0.0	1.0	0.3
state	sLittWC	Litter water content	DOUBLE	m3/m3	0.0	10000.0	0.0
state	sLitterC	Total carbon in the litter pool	DOUBLE	kg/ha	0.0	999999.0	0.0
state	sLitterCutback	indicator for CalcCFlow in the CutBackDecomp strategy	INT	1	0	1	0
state	sLitterN	Total nitrogen in the litter pool	DOUBLE	kg/ha	0.0	999999.0	0.0
state	sLittersoilC	Total carbon in the belowground litter	DOUBLEARRAY	kg/ha	-	-	-
state	sLittersoilN	Total nitrogen in the belowground litter	DOUBLEARRAY	kg/ha	-	-	-
state	sLittersurfC	Total carbon in the aboveground litter	DOUBLE	kg/ha	-	-	-
state	sLittersurfN	Total nitrogen in the aboveground litter	DOUBLE	kg/ha	-	-	-
state	sMaxFWC	Maximum observed field water content	DOUBLEARRAY	m3/m3	-	-	-
state	sMaxncact	Maximum N:C ratio of the microbial biomass	DOUBLE	g/g	0.0	1.0	0.05
state	sMetabsoilC	Amount of carbon in the metabolic pool of belowground litter	DOUBLEARRAY	kg/ha	-	-	-
state	sMetabsoilN	Amount of nitrogen in the metabolic pool of belowground litter	DOUBLEARRAY	kg/ha	-	-	-
state	sMetabsurfC	Amount of carbon in the metabolic pool of aboveground litter	DOUBLE	kg/ha	-	-	-
state	sMetabsurfN	Amount of nitrogen in the metabolic pool of aboveground litter	DOUBLE	kg/ha	-	-	-
state	sMicroblabC	Amount of carbon in the labile microbial biomass pool	DOUBLEARRAY	kg/ha	-	-	-
state	sMicroblabN	Amount of nitrogen in the labile microbial biomass pool	DOUBLEARRAY	kg/ha	-	-	-
state	sMicrobrstC	Amount of carbon in the resistant microbial biomass pool	DOUBLEARRAY	kg/ha	-	-	-
state	sMicrobrstN	Amount of nitrogen in the resistant microbial biomass pool	DOUBLEARRAY	kg/ha	-	-	-
state	sMicrobsoilC	Total carbon in the microbial biomass pool	DOUBLEARRAY	kg/ha	-	-	-
state	sMicrobsoilN	Total nitrogen in the microbial biomass pool	DOUBLEARRAY	kg/ha	-	-	-
state	sMinFWC	Minimum observed field water content	DOUBLEARRAY	m3/m3	-	-	-
state	sNCfluxratio	N:C ratio of the litter decomposition flow	DOUBLE	g/g	-	-	-
state	sNDemandByLayer_Plant1	N demand by soil layer and by infra-day time step for plant 1	DOUBLEARRAY	kg/ha	-	-	-
state	sNDemandByLayer_Plant2	N demand by soil layer and by infra-day time step for plant 2	DOUBLEARRAY	kg/ha	-	-	-
state	sNinorg	Total inorganic nitrogen in the soil	DOUBLEARRAY	kg/ha	-	-	-
state	sNitract	Nitrogen factor affecting decomposition	DOUBLEARRAY	1	-	-	-
state	sNumLayers	Number of Soil Layers	INT	1	1	999	1
state	sOldSOMsoilC	Amount of carbon in the old SOM (passive	DOUBLEARRAY	kg/ha	-	-	-
state	sOldSOMsoilN	Amount of nitrogen in the old SOM pool in soil (Passive	DOUBLEARRAY	kg/ha	-	-	-
state	sRootLengthDensityPlant1	Plant1 root length density by layer	DOUBLEARRAY	m/m3	-	-	-
state	sRootLengthDensityPlant2	Plant2 root length density by layer	DOUBLEARRAY	m/m3	-	-	-
state	sRootsoilC	Amount of carbon in the root pool in belowground litter	DOUBLEARRAY	kg/ha	-	-	-
state	sRootsoilN	Amount of nitrogen in the root pool in belowground litter	DOUBLEARRAY	kg/ha	-	-	-
state	sSilt	Part of silt in soil	DOUBLEARRAY	g/g	-	-	-
state	sSoilC	Total carbon in the soil	DOUBLEARRAY	kg/ha	-	-	-
state	sSoilN	Total nitrogen in the soil	DOUBLEARRAY	kg/ha	-	-	-
state	sSoilTemp	Soil temperature	DOUBLEARRAY	°C	-	-	-
state	sSoilWC	Soil water content	DOUBLEARRAY	m3/m3	-	-	-
state	sSoilorgN	Amount of organic nitrogen in the soil	DOUBLEARRAY	kg/ha	-	-	-
state	sStemsurfC	Amount of carbon in the stem pool in surface litter	DOUBLE	kg/ha	0.0	999999.0	0.0
state	sStemsurfN	Amount of nitrogen in the stem pool in surface litter	DOUBLE	kg/ha	0.0	999999.0	0.0
state	sStructsoilC	Amount of carbon in the structural pool of belowground litter	DOUBLEARRAY	kg/ha	-	-	-
state	sStructsoilN	Amount of nitrogen in the structural pool of belowground litter	DOUBLEARRAY	kg/ha	-	-	-
state	sStructsurfC	Amount of carbon in the structural pool of the surface litter	DOUBLE	kg/ha	-	-	-
state	sStructsurfN	Amount of nitrogen in the structural pool of the surface litter	DOUBLE	kg/ha	-	-	-
state	sTempact	Temperature factor affecting decomposition	DOUBLEARRAY	1	-	-	-
state	sTextact	Texture factor on decomposition (stabilization	DOUBLEARRAY	1	-	-	-
state	sTotalC	Total carbon in the system	DOUBLE	kg/ha	0.0	999999.0	0.0
state	sTotalCBefore	Total C in the system at begin of day	DOUBLE	kg/ha	0.0	999999.0	0.0
state	sTotalCarbonLosses	losses of the system	DOUBLE	kg/ha	0.0	999999.0	0.0
state	sTotalN	Total nitrogen in the system	DOUBLE	kg/ha	0.0	999999.0	0.0
state	sTotalNBefore	Total N in the system at begin of day	DOUBLE	kg/ha	0.0	999999.0	0.0
state	sTotalNUp	total plant N uptake by layer	DOUBLEARRAY	kg/ha	-	-	-
state	sTotalSoilC	Total C in soil	DOUBLE	kg/ha	0.0	999999.0	0.0
state	sTotalSoilCBefore	Notice: presently it has total C in the system at begin of day (same as sTotalCBefore, not only C in soil) - will be corrected in future version	DOUBLE	kg/ha	0.0	999999.0	0.0
state	sTotalSoilN	Total N in soil	DOUBLE	kg/ha	0.0	999999.0	0.0
state	sTotalSoilNBefore	Notice: presently it has total n in the system at begin of day (same as sTotalCBefore, not only N in soil) - will be corrected in future	DOUBLE	kg/ha	0.0	999999.0	0.0
state	sTotalorgN	Total organic nitrogen in the system	DOUBLE	kg/ha	0.0	999999.0	0.0
state	sWatactsoil	Water factor affecting belowground decomposition	DOUBLEARRAY	1	0.0	1.0	-
state	sWatactsurf	Water factor affecting aboveground decomposition	DOUBLE	1	0.0	1.0	1.0
state	sYfact	Microbial efficiency	DOUBLEARRAY	1	-	-	-
state	sYoungSOMsoilC	Amount of carbon in the young SOM (slow	DOUBLEARRAY	kg/ha	-	-	-
state	sYoungSOMsoilN	Amount of nitrogen in the young SOM (slow	DOUBLEARRAY	kg/ha	-	-	-
state	sstabtext	simple factor which drives texture effect on decomposition	DOUBLEARRAY	1	-	-	-
rate	rCactlab	Net flux of carbon to labile biomass (Active 1	DOUBLEARRAY	1	-	-	-
rate	rCactrst	Net flux of carbon to resistant biomass (Active 2	DOUBLEARRAY	1	-	-	-
rate	rCarbonloss	Total carbon losses of the system during the day	DOUBLE	kg/(ha d)	-2000.0	2000.0	0.0
rate	rCellose1	C flow from surface cellulose pool to microbial biomass	DOUBLE	kg/(ha d)	-2000.0	2000.0	0.0
rate	rCellose2	C flow from surface cellulose pool to microbial biomass	DOUBLE	kg/(ha d)	-2000.0	2000.0	0.0
rate	rCellose3	C flow from soil cellulose pool to microbial biomass	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rCellose4	C flow from soil cellulose pool to microbial biomass	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rCinLitt	Carbon inputs in soil pools	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rCinSoil	Carbon inputs in litter pool	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rCinmicrob	Carbon input from litter decomposition to microbial pool	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rClisl	Net flux of carbon to lignocellulosic pool of soil litter	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rClisu	Net flux of carbon to lignocellulosic pool of surface litter	DOUBLE	kg/(ha d)	-2000.0	2000.0	0.0
rate	rCmtsl	Net flux of carbon to metabolic pool of belowground litter	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rCmtsu	Net flux of carbon from plant to metabolic pool of aboveground litter	DOUBLE	kg/(ha d)	-2000.0	2000.0	0.0
rate	rCo21	C loss by respiration	DOUBLE	kg/(ha d)	-2000.0	2000.0	0.0
rate	rCo210	C loss by respiration	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rCo211	C loss by respiration	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rCo212	C loss by respiration	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rCo213	C loss by respiration	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rCo22	C loss by respiration	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rCo23	C loss by respiration	DOUBLE	kg/(ha d)	-2000.0	2000.0	0.0
rate	rCo24	C loss by respiration	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rCo25	C loss by respiration	DOUBLE	kg/(ha d)	-2000.0	2000.0	0.0
rate	rCo26	C loss by respiration	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rCoutSoil	Carbon outputs out of mineral soil pools	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rCpas	Net flux of carbon to old SOM (passive	DOUBLEARRAY	1	-	-	-
rate	rCslo	Net flux of carbon to young SOM (slow	DOUBLEARRAY	1	-	-	-
rate	rCstsl	Net flux of carbon to cellulose structural pool of belowground litter	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rCstsu	Net flux of carbon to cellulose structural pool of aboveground litter	DOUBLE	kg/(ha d)	-2000.0	2000.0	0.0
rate	rDailyNleach	N loss by leaching from one layer to the deeper one	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rDeadbranch	Carbon inputs in the litter from the Dead branches	DOUBLE	kg/(ha d)	0.0	999999.0	0.0
rate	rDeadbranchN	Nitrogen inputs in the litter from the Dead branches	DOUBLE	kg/(ha d)	0.0	999999.0	0.0
rate	rDeadleafN	Nitrogen inputs in the litter from the Dead leaves	DOUBLE	kg/(ha d)	0.0	999999.0	0.0
rate	rDeadleaves	Carbon inputs in the litter from the Dead leaves	DOUBLE	kg/(ha d)	0.0	999999.0	0.0
rate	rDeadrootN	Nitrogen inputs in the litter from the Dead roots	DOUBLEARRAY	kg/(ha d)	-	-	-
rate	rDeadroots	Carbon inputs in the litter from the Dead roots	DOUBLEARRAY	kg/(ha d)	-	-	-
rate	rDeadstemN	Nitrogen inputs in the litter from the Dead stems	DOUBLE	kg/(ha d)	0.0	999999.0	0.0
rate	rDeadstems	Carbon inputs in the litter from the Dead stems	DOUBLE	kg/(ha d)	0.0	999999.0	0.0
rate	rDeltaNinorg	Net flux of nitrogen to young SOM (slow	DOUBLE	1	-	-	-
rate	rExtract1	Flows of carbon from metabolic pools to active pools	DOUBLE	kg/(ha d)	-2000.0	2000.0	0.0
rate	rExtract2	Flows of carbon from metabolic pools to active pools	DOUBLE	kg/(ha d)	-2000.0	2000.0	0.0
rate	rExtract3	Flows of carbon from metabolic pools to active pools	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rExtract4	Flows of carbon from metabolic pools to active pools	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rGrossminlit	release by litter	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rHumads1	C flow from young SOM to labile biomass	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rHumads2	C flow from young SOM to resistant biomass	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rHumads3	C flow from young SOM to passive pool	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rHumus1	C flow from old SOM to labile biomass	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rHumus2	C flow from old SOM to resistant biomass	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rImmob10	N immobilisation flow	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rImmob11	N immobilisation flow	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rImmob12	N immobilisation flow	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rImmob13	N immobilisation flow	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rImpassive	N immobilisation in passive pool (Old SOM	DOUBLEARRAY	1	-	-	-
rate	rImslow1	N immobilisation fluxes from surface lignocellulotic pool to slow pool (Young SOM	DOUBLE	1	-	-	-
rate	rImslow2	N immobilisation fluxes from soil lignocellulotic pool to slow pool (Young SOM	DOUBLEARRAY	1	-	-	-
rate	rImslow3	N immobilisation fluxes through decomposition of branch pool	DOUBLE	kg/(ha d)	-2000.0	20.0	0.0
rate	rImslow4	N immobilisation fluxes through decomposition of stem pool	DOUBLE	kg/(ha d)	-2000.0	20.0	0.0
rate	rImslow5	N immobilisation fluxes through decomposition of coarse roots pool	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rImslow6	N immobilisation flux through decomposition of SOM pool	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rImslow7	N immobilisation flux through decomposition of SOM pool	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rK10act	Decomposition rate for labile pool of active biomass	DOUBLEARRAY	d-1	0.0	999999.0	-
rate	rK11act	Decomposition rates for resistant pool of active biomass	DOUBLEARRAY	d-1	0.0	999999.0	-
rate	rK12slo	Decomposition rate of young SOM pool (slow pool	DOUBLEARRAY	1	-	-	-
rate	rK5act	surface lignocellulose litter decomposition rate	DOUBLE	d-1	0.0	999999.0	0.0
rate	rK6act	Soil lignocellulose litter decomposition rate	DOUBLEARRAY	d-1	0.0	999999.0	-
rate	rK7act	Decay rates for branches	DOUBLE	d-1	0.0	999999.0	0.0
rate	rK8act	Decay rates for stems	DOUBLE	d-1	0.0	999999.0	0.0
rate	rK9act	Decay rates for coarse roots	DOUBLEARRAY	d-1	0.0	999999.0	-
rate	rLactlab	Net efflux of nitrogen from labile biomass pool	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rLactrst	Net efflux of nitrogen from resistant biomass pool	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rLigncellose1	C flow from surface lignocellulosic pool to Young SOM	DOUBLE	kg/(ha d)	-2000.0	2000.0	0.0
rate	rLigncellose2	C flow from surface lignocellulosic pool to microbial biomass	DOUBLE	kg/(ha d)	-2000.0	2000.0	0.0
rate	rLigncellose3	C flow from surface lignocellulosic pool to microbial biomass	DOUBLE	kg/(ha d)	-2000.0	2000.0	0.0
rate	rLigncellose4	C flow from soil lignocellulosic pool to young SOM	DOUBLEARRAY	kgC/ha/d	-2000.0	2000.0	-
rate	rLigncellose5	C flow from soil lignocellulosic pool to microbial biomass	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rLigncellose6	C flow from soil lignocellulosic pool to microbial biomass	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rLitimmobslow	Sum of nitrogen immobilisation (through litter	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rLlisl	Net efflux of nitrogen from structural ligno-cellulose (fine root	DOUBLEARRAY	kg/(ha d)	-20.0	20.0	-
rate	rLlisu	Net efflux of nitrogen from structural ligno-cellulose (leaf	DOUBLE	kg/(ha d)	-20.0	20.0	0.0
rate	rLmtsl	Net efflux of nitrogen from metabolic soil	DOUBLEARRAY	kg/(ha d)	-20.0	20.0	-
rate	rLmtsu	Net efflux of nitrogen from metabolic surface	DOUBLE	kg/(ha d)	-20.0	20.0	0.0
rate	rLpas	Net efflux of nitrogen from passive pool (Old SOM	DOUBLEARRAY	1	-	-	-
rate	rLslo	Net efflux of nitrogen from slow pool (Young SOM	DOUBLEARRAY	1	-	-	-
rate	rLstbra	Net efflux of nitrogen from branches (surface	DOUBLE	1	-	-	-
rate	rLstcoro	Net efflux of nitrogen from coarse roots (soil	DOUBLEARRAY	1	-	-	-
rate	rLstsl	Net efflux of nitrogen from structural cellulose (fine root	DOUBLEARRAY	kg/(ha d)	-20.0	20.0	-
rate	rLststem	Net efflux of nitrogen from stem (surface	DOUBLE	1	-	-	-
rate	rLstsu	Net efflux of nitrogen from structural cellulose (leaf and faeces	DOUBLE	1	-	-	-
rate	rMicrob1	C flow from labile biomass to labile biomass	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rMicrob2	C flow from labile biomass to resistant biomass	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rMicrob3	C flow from labile biomass to slow pool	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rMicrob4	C flow from resistant biomass to labile biomass	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rMicrob5	C flow from resistant biomass to resistant biomass	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rMicrob6	C flow from resistant biomass to slow pool	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rNDemand_Plant1	Plant1 N daily demand	DOUBLE	kg/(ha d)	0.0	20.0	0.0
rate	rNDemand_Plant2	Plant2 N daily demand	DOUBLE	kg/(ha d)	0.0	20.0	0.0
rate	rNUptakeByLayerPlant1	N uptake in each soil layer by plant 1	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rNUptakeByLayerPlant2	N uptake in each soil layer by plant 2	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rNUptakePlant1	N uptake by plant 1	DOUBLE	kg/(ha d)	-2000.0	2000.0	0.0
rate	rNUptakePlant2	N uptake by plant 2	DOUBLE	kg/(ha d)	-2000.0	2000.0	0.0
rate	rNactlab	Net flux of nitrogen to labile biomass (Active 1	DOUBLEARRAY	1	-	-	-
rate	rNactrst	Net flux of nitrogen to resistant biomass (Active 2	DOUBLEARRAY	1	-	-	-
rate	rNetminsom	Sum of nitrogen mineralisation from SOM pools	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rNferti	Nitrogen fertilization	DOUBLEARRAY	kg/(ha d)	-	-	-
rate	rNgross	Gross N mineralisation	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rNimmob	Gross N immobilisation	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rNleach	N loss by leaching from one layer to the deeper one	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rNlisl	Net flux of nitrogen to lignocellulosic pool of soil litter	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rNlisu	Net flux of nitrogen to lignocellulosic pool of surface litter	DOUBLE	kg/(ha d)	-2000.0	20.0	0.0
rate	rNloss	Nitrogen losses	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rNmicrobupt	N microbial uptake	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rNmstl	Net flux of nitrogen to metabolic pool of belowground litter	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rNmtsu	Net flux of nitrogen from plant to metabolic pool of aboveground litter	DOUBLE	kg/(ha d)	-2000.0	20.0	0.0
rate	rNpas	Net flux of nitrogen to old SOM (passive	DOUBLEARRAY	1	-	-	-
rate	rNslo	Net flux of nitrogen to young SOM (slow	DOUBLEARRAY	1	-	-	-
rate	rNstbra	Net flux of nitrogen to structural branches pool of surface litter	DOUBLE	kg/(ha d)	-2000.0	20.0	0.0
rate	rNstcoro	Net flux of nitrogen to structural stem pool of surface litter	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rNstsl	Net flux of nitrogen to cellulose structural pool of belowground litter	DOUBLEARRAY	kg/(ha d)	-2000.0	20.0	-
rate	rNststem	Net flux of nitrogen to structural stem pool of surface litter	DOUBLE	kg/(ha d)	-2000.0	20.0	0.0
rate	rNstsu	Net flux of nitrogen to cellulose structural pool of aboveground litter	DOUBLE	kg/(ha d)	-2000.0	20.0	0.0
rate	rResp	Total loss of carbon by respiration	DOUBLEARRAY	kg/(ha d)	-20000.0	20000.0	-
rate	rSoildecomp	Soil decomposition rate	DOUBLEARRAY	kg/(ha d)	-2000.0	2000.0	-
rate	rWatFlux	Water flow from one layer to the lower one	DOUBLEARRAY	mm/d	-	-	-
out	CBalance	C balance	DOUBLE	g/m2	-	-	0.0
out	CummulatedDeadPlantN	inorganic Nitrogen	DOUBLE	g/m2	-	-	0.0
out	CummulatedLossMineralN	inorganic Nitrogen loss due to plant uptake and seeping	DOUBLE	g/m2	-	-	0.0
out	NBalance	N balance	DOUBLE	g/m2	-	-	0.0
out	Ninorg	inorganic Nitrogen	DOUBLEARRAY	g/m2	-	-	-

Nested Class Summary

Nested classes/interfaces inherited from class net.simplace.sim.model.FWSimComponent
net.simplace.sim.model.FWSimComponent.TEST_STATE
Field Summary

Fields

Modifier and Type

Field

Description

protected Auxiliary

aux

protected CalcCFlows

CFlows

protected CalcCPools

CPools

protected CutbackDecomp

Cutback

protected final double

gm2_to_kgha

protected CalcNFlows

NFlows

protected CalcNPools

NPools

protected ParamC

paramC

protected ParamCrop

paramCrop

protected ParamN

paramN

protected ParamSoil

paramSoil

protected CalcStressFactors

Stress

protected int

tNumLayers

Fields inherited from class net.simplace.sim.model.FWSimComponent
iFieldMap, iFrequence, iInputMap, iJexlRule, iMasterComponentGroup, iName, iOrderNumber, isComponentGroup, iSimComponentElement, iSimModel, iVarMap
Constructor Summary

Constructors

Constructor

Description

SoilCN()

SoilCN(String aName, HashMap<String,net.simplace.sim.util.FWSimVariable<?>> aFieldMap, HashMap<String,String> aInputMap, org.jdom2.Element aSimComponentElement, net.simplace.sim.util.FWSimVarMap aVarMap, int aOrderNumber)
Method Summary

Modifier and Type

Method

Description

protected void

calculatePools(ParamSoil pSoil, ParamCrop pCrop, ParamC pC, ParamN pN, Auxiliary a, States s, Rates r)

protected net.simplace.sim.model.FWSimComponent

clone(net.simplace.sim.util.FWSimVarMap aVarMap)

protected void

createEmptyLayers(States s, Rates r, Outputs out)

initialise the number of soil layers

HashMap<String,net.simplace.sim.util.FWSimVariable<?>>

createVariables()

HashMap<String,net.simplace.sim.util.FWSimVariable<?>>

fillTestVariables(int aParamIndex, net.simplace.sim.model.FWSimComponent.TEST_STATE aDefineOrCheck)

called for single component test to check the components algorithm.

protected Double[]

horizonToLayer(Double[] Var, Double[] HorThick, Double[] LayThick)

protected void

init()

protected void

initializeVariables()

initialize Variables

protected void

intializePools(InitialStates init, Auxiliary a, ParamSoil pSoil, ParamN pN, States s, Rates r)

initialize microbs, SOM and Mineral nitrogen pools

protected void

process()

protected void

reset()

Resets variables to initial conditions

protected void

updateInput(ParamC pC, ParamN pN, Inputs in, States s, Rates r)

protected void

updateOutput(Inputs in, Outputs out, States s, Rates r)

protected void

updateStates(States s, Rates r)

Methods inherited from class net.simplace.sim.model.FWSimComponent
addVariable, bind, checkCondition, createSimComponent, createSimComponent, createSimComponent, createSimComponent, doProcess, getConstantVariables, getContentType, getCreateFormXML, getDescription, getEditFormXML, getFieldMap, getFrequence, getFrequenceRuleScript, getInputs, getInputVariables, getMasterComponentGroup, getName, getOrderNumber, getOutputVariables, getVariable, getVariableField, getVarMap, initialize, isConditionCheck, isVariableAvailable, performLinks, performLinks, readInputs, removeVariable, reset, runComponentTest, setVariablesDefault, toComponentLinkingXML, toDocXML, toGroupXML, toOutputDefinitionXML, toResourcesDataXML, toResourcesDefinitionXML, toString, toXML, writeVarInfos

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Details
- tNumLayers
  
  protected int tNumLayers
- CFlows
  
  protected CalcCFlows CFlows
- CPools
  
  protected CalcCPools CPools
- NFlows
  
  protected CalcNFlows NFlows
- NPools
  
  protected CalcNPools NPools
- Stress
  
  protected CalcStressFactors Stress
- Cutback
  
  protected CutbackDecomp Cutback
- aux
  
  protected Auxiliary aux
- paramC
  
  protected ParamC paramC
- paramN
  
  protected ParamN paramN
- paramCrop
  
  protected ParamCrop paramCrop
- paramSoil
  
  protected ParamSoil paramSoil
- gm2_to_kgha
  
  protected final double gm2_to_kgha
  See Also:
  
  Constant Field Values
Constructor Details
- SoilCN
  
  public SoilCN(String aName, HashMap<String,net.simplace.sim.util.FWSimVariable<?>> aFieldMap, HashMap<String,String> aInputMap, org.jdom2.Element aSimComponentElement, net.simplace.sim.util.FWSimVarMap aVarMap, int aOrderNumber)
  
  Parameters:
  
  aName -
  
  aFieldMap -
  
  aInputMap -
  
  aSimComponentElement -
  
  aVarMap -
  
  aOrderNumber -
- SoilCN
  
  public SoilCN()
Method Details
- createVariables
  
  public HashMap<String,net.simplace.sim.util.FWSimVariable<?>> createVariables()
  
  Specified by:
  
  createVariables in interface net.simplace.sim.util.FWSimFieldContainer
  
  Specified by:
  
  createVariables in class net.simplace.sim.model.FWSimComponent
- init
  
  protected void init()
  
  Specified by:
  
  init in class net.simplace.sim.model.FWSimComponent
- reset
  
  protected void reset()
  
  Resets variables to initial conditions
- initializeVariables
  
  protected void initializeVariables()
  
  initialize Variables
- process
  
  protected void process()
  
  Specified by:
  
  process in class net.simplace.sim.model.FWSimComponent
- calculatePools
  
  protected void calculatePools(ParamSoil pSoil, ParamCrop pCrop, ParamC pC, ParamN pN, Auxiliary a, States s, Rates r)
  
  Parameters:
  
  pSoil -
  
  pCrop -
  
  pC -
  
  pN -
  
  a -
  
  s -
  
  r -
- updateStates
  
  protected void updateStates(States s, Rates r)
  
  Parameters:
  
  s -
  
  r -
- updateInput
  
  protected void updateInput(ParamC pC, ParamN pN, Inputs in, States s, Rates r)
  
  Parameters:
  
  pC -
  
  pN -
  
  in -
  
  s -
  
  r -
- updateOutput
  
  protected void updateOutput(Inputs in, Outputs out, States s, Rates r)
- createEmptyLayers
  
  protected void createEmptyLayers(States s, Rates r, Outputs out)
  
  initialise the number of soil layers
  
  Parameters:
  
  s -
  
  r -
  
  out -
- intializePools
  
  protected void intializePools(InitialStates init, Auxiliary a, ParamSoil pSoil, ParamN pN, States s, Rates r)
  
  initialize microbs, SOM and Mineral nitrogen pools
  
  Parameters:
  
  init -
  
  a -
  
  pSoil -
  
  pN -
  
  s -
  
  r -
- horizonToLayer
  
  protected Double[] horizonToLayer(Double[] Var, Double[] HorThick, Double[] LayThick)
- fillTestVariables
  
  public HashMap<String,net.simplace.sim.util.FWSimVariable<?>> fillTestVariables(int aParamIndex, net.simplace.sim.model.FWSimComponent.TEST_STATE aDefineOrCheck)
  
  called for single component test to check the components algorithm.
  Specified by:
  
  fillTestVariables in class net.simplace.sim.model.FWSimComponent
  
  See Also:
  
  net.simplace.sim.util.FWSimFieldContainer#fillTestVariables(int aParamIndex, TEST_STATE aDefineOrCheck)
- clone
  
  protected net.simplace.sim.model.FWSimComponent clone(net.simplace.sim.util.FWSimVarMap aVarMap)
  
  Specified by:
  
  clone in class net.simplace.sim.model.FWSimComponent

Class SoilCN

Component Variables

Nested Class Summary

Nested classes/interfaces inherited from class net.simplace.sim.model.FWSimComponent

Field Summary

Fields inherited from class net.simplace.sim.model.FWSimComponent

Constructor Summary

Method Summary

Methods inherited from class net.simplace.sim.model.FWSimComponent

Methods inherited from class java.lang.Object

Field Details

tNumLayers

CFlows

CPools

NFlows

NPools

Stress

Cutback

aux

paramC

paramN

paramCrop

paramSoil

gm2_to_kgha

Constructor Details

SoilCN

SoilCN

Method Details

createVariables

init

reset

initializeVariables

process

calculatePools

updateStates

updateInput

updateOutput

createEmptyLayers

intializePools

horizonToLayer

fillTestVariables

clone