Package net.simplace.sim.components.models.lintul5.extended.cassava

Class Lintul5Cassava

java.lang.Object

net.simplace.sim.model.FWSimComponent

net.simplace.sim.components.models.lintul5.extended.cassava.Lintul5Cassava

All Implemented Interfaces:

net.simplace.sim.util.FWSimFieldContainer

public class Lintul5Cassava
extends net.simplace.sim.model.FWSimComponent

Lintul5Cassava - Model to simulate cassava growth - based on Lintul5 model

Introduction

Lintul5Cassava extends Lintul5 to simulate growth of cassava. The code originates from the FST version of the model, provided by Guillaume K.S. Ezui (see (L2C)).

Main differences are:

• initial biomass is determined by the weight of cuttings
• there is an additional phenology stage for branching
• translocation from leaves to storage organs
• dormancy under drought conditions
• dormancy recover with translocations from storage organs and stems to leaves

The original model is written for the FortranSimulationTranslator (FST) and extends Lintul2. This implementation extends Lintul5. In order to use it, one should replace the Lintul5 sim component with Lintul5Cassava. The standard setting is as follows:

1. Irradiation
2. PotentialEvapoTranspiration
3. WaterBalance
4. Phenology
5. RadiationUseEfficiency
6. !Lintul5Cassava

Daylength calculation is performed by the transformer component AstronomicParametersTransformer

Description

For documentation of the algorithms please consult the orginal of the cassava model (2C) and the Lintul5 documentation (L5)

Changes to original

Control / Program flow

Has additional inputs iDoSow and iDoHarvest. The main routine starts running when iDoSow is true and runs every day until iDoHarvest is true.

• On iDoSow the model is (re)initialized and then the calculation is performed.
• On iDoHarvest all the outputs/states/rates are reset to their defaults (mostly 0). No further calculation is performed.

Additional Outputs

The output WithCrop is true between iDoSow (incl.) and iDoHarvest (excl.). It's an indicator, that the calculation has been performed on that day.

Scale factors for calibration

As some parameters are given as interpolation tables, there have been added additional scale factors to make these values changeable for calibrations:

• cScaleFactorSLA
• cScaleFactorKDIF
• cScaleFactorFERK
• cScaleFactorFERN
• cScaleFactorFERP

References

• (L2C) Guillaume K.S. Ezui, Lintul2Cassava
• (L5) Joost Wolf, User guide for LINTUL5, Wageningen UR, Wageningen, 2012

Author:

G. Krauss

See Also:

• Irradiation
• PotentialEvapoTranspiration
• WaterBalance
• Phenology
• RadiationUseEfficiency

Component Variables

Content Type	Name	Description	Data Type	Unit	Min Value	Max Value	Default Value
constant	cBasicRelativeDeathRateLeaves	Basic Relative Death Rate Leaves due to water content - RDRDB (smaller WCSD or bigger WCWET)	DOUBLE	d-1	-	-	0.09
constant	cCuttingDeclineRate	Relative decrease rate of cuttings weight (c.f. RDRWCUTTING)	DOUBLE	d-1	-	-	0.017
constant	cCuttingFractionLeaves	Proportions of stem cutting weight at planting allocated to the production of leaves at emergence (c.f. FLV_CUTT)	DOUBLE	1	-	-	0.07
constant	cCuttingFractionRoots	Proportions of stem cutting weight at planting allocated to the production of roots at emergence (c.f. FRT_CUTT)	DOUBLE	1	-	-	0.03
constant	cCuttingFractionStems	Proportions of stem cutting weight at planting allocated to the production of stems at emergence (c.f. FST_CUTT)	DOUBLE	1	-	-	0.03
constant	cCuttingFractionStorageOrgans	Proportions of stem cutting weight at planting allocated to the production of storage organs at emergence (c.f. FSO_CUTT)	DOUBLE	1	-	-	0.0
constant	cCuttingMinimalFactor	Minimum proportion of the stem cutting weight that remains unchanged (c.f. WCUTTINGMINPRO)	DOUBLE	1	-	-	0.15
constant	cDVSDR	development stage above which death of roots and stems starts	DOUBLE	1	-	-	1.0
constant	cDVSI	initial development stage of crop (from 0 to 2)	DOUBLE	1	-	-	0.0
constant	cDVSNLT	DVS stage above which no N, P and K uptakes by the crop do occur	DOUBLE	1	-	-	1.3
constant	cDVSNT	DVS stage above which N, P and K translocations to storage organs occur -	DOUBLE	1	-	-	0.8
constant	cDeadLeavesReallocationFraction	Proportion of senesced leaf weight translocated to storage roots before the shedding of the leaf (c.f. FASTRANSLSO)	DOUBLE	1	-	-	0.45
constant	cDroughtRecoveryFraction	Proportion of critical soil water content above which the crop recovers from drought	DOUBLE	1	-	-	0.7
constant	cFERKTAB	table with fertiliser K applications at given days	DOUBLEARRAY	g/(m2 d)	-	-	-
constant	cFERNTAB	table with fertiliser N applications at given days	DOUBLEARRAY	g/(m2 d)	-	-	-
constant	cFERPTAB	table with fertiliser P applications at given days	DOUBLEARRAY	g/(m2 d)	-	-	-
constant	cFLTB	Deprecated: please use cLeavesPartitioningTableFraction/DVS. Fraction table of abovre-gr. biomass to leaves as function of DVS	DOUBLEARRAY		-	-	-
constant	cFNTRT	N-P-K translocations from roots as a fraction of resp. total N-P-K amounts translocated from leaves and stems	DOUBLE	1	-	-	0.15
constant	cFOTB	Deprecated: please use cStorageOrgansPartitioningTableFraction/DVS. Fraction table of abovre-gr. biomass to storage organs as function of DVS	DOUBLEARRAY		-	-	-
constant	cFRKX	optimal K concentration as fraction of maximal K concentration	DOUBLE	1	-	-	1.0
constant	cFRNX	optimal N concentration as fraction of maximal N concentration	DOUBLE	1	-	-	1.0
constant	cFRPX	optimal P concentration as fraction of maximal P concentration	DOUBLE	1	-	-	1.0
constant	cFRTB	Deprecated: please use cRootsPartitioningTableFraction/DVS. Fraction table of total biomass to roots as function of DVS	DOUBLEARRAY		-	-	-
constant	cFSTB	Deprecated: please use cStemsPartitioningTableFraction/DVS. Fraction table of abovre-gr. biomass to stems as function of DVS	DOUBLEARRAY		-	-	-
constant	cFractionOfLeafLifeForEnhancedShedding	fraction of the leaf life from which enhanced shedding can start - FRACTLLFENHSH	DOUBLE	d-1	0.5	1.0	0.85
constant	cIOPT	indicates optimal (=1), water limited (=2), water and N limited (=3) and water and N, P and K limited run (=4)	INT	1	-	-	0
constant	cInitialCutting	Stem cutting weight at planting (c.f. WCUTTINGIP)	DOUBLE	g/m2	-	-	0.0
constant	cKDIFTB	table of light extinction factor as function of DVS	DOUBLEARRAY	1	-	-	-
constant	cKDIFTableDVS	DVS for extiction coefficient for diffuse visible light (c.f. KDIFTB)	DOUBLEARRAY	1	-	-	-
constant	cKDIFTableK	Extinction cofficient for diffuse visible light as function of DVS (c.f. KDIFTB)	DOUBLEARRAY	1	-	-	-
constant	cKMAXSO	maximal K concentration in storage organs	DOUBLE	g/g	-	-	0.0048
constant	cKMINI	initial amount (at crop emergence) of potentially available soil K	DOUBLE	g/m2	-	-	0.0
constant	cKMXLV	table with maximal N concentration in leaves as function of DVS	DOUBLEARRAY	g/g	-	-	-
constant	cKMaxTableConcentration	Maximum K concentration in leaves as function of DVS (c.f. KMXLV)	DOUBLEARRAY	g/g	-	-	-
constant	cKMaxTableDVS	DVS for maximum K concentration in leaves (c.f. KMXLV)	DOUBLEARRAY	1	-	-	-
constant	cKRF	recovery fractions of fertiliser K applications	DOUBLE	1	0.0	1.0	-
constant	cKRFTAB	table with recovery fractions of fertiliser K applications	DOUBLEARRAY	1	-	-	-
constant	cLAICR	Critical leaf area index for overshadowing	DOUBLE	m2/m2	-	-	4.0
constant	cLRKR	maximum K concentration in roots as fraction of maximum K concentration in leaves	DOUBLE	1	-	-	0.5
constant	cLRNR	maximum N concentration in roots as fraction of maximum N concentration in leaves	DOUBLE	1	-	-	0.5
constant	cLRPR	maximum P concentration in roots as fraction of maximum P concentration in leaves	DOUBLE	1	-	-	0.5
constant	cLSKR	maximum K concentration in stems as fraction of maximum K concentration in leaves	DOUBLE	1	-	-	0.5
constant	cLSNR	maximum N concentration in stems as fraction of maximum N concentration in leaves	DOUBLE	1	-	-	0.5
constant	cLSPR	maximum P concentration in stems as fraction of maximum P concentration in leaves	DOUBLE	1	-	-	0.5
constant	cLaiMin	Minimum leaf area index (c.f. LAI_MIN)	DOUBLE	m2/m2	-	-	0.09
constant	cLeafLifeTsum	Temperature sum for maximal leave life age (c.f.TSUMLLIFE)	DOUBLE	°C d	-	-	1200.0
constant	cLeavesPartitioningTableDVS	DVS for fraction of above-ground dry matter to leaves (c.f. FLTB)	DOUBLEARRAY	1	-	-	-
constant	cLeavesPartitioningTableFraction	Fraction of above-ground dry matter to leaves as function of DVS (c.f. FLTB)	DOUBLEARRAY	1	0.0	1.0	-
constant	cNFIXF	fraction of crop N uptake by biological fixation	DOUBLE	1	-	-	0.0
constant	cNLAI	coefficient for the reduction due to nutrient (N-P-K) stress of the LAI increase (during juvenile phase)	DOUBLE	1	-	-	1.0
constant	cNLUE	coefficient for the reduction of RUE due to nutrient (N-P-K) stress	DOUBLE	1	-	-	1.1
constant	cNMAXSO	maximal N concentration in storage organs	DOUBLE	g/g	-	-	0.0176
constant	cNMINI	initial amount (at crop emergence) of potentially available soil organic N	DOUBLE	g/m2	-	-	0.0
constant	cNMXLV	table with maximal N concentration in leaves as function of DVS	DOUBLEARRAY	g/g	-	-	-
constant	cNMaxTableConcentration	Maximum N concentration in leaves as function of DVS (c.f. NMXLV)	DOUBLEARRAY	g/g	-	-	-
constant	cNMaxTableDVS	DVS for maximum N concentration in leaves (c.f. NMXLV)	DOUBLEARRAY	1	-	-	-
constant	cNPART	coefficient for N stress-effect on leaf biomass reduction	DOUBLE	1	-	-	1.0
constant	cNRF	recovery fractions of fertiliser N applications	DOUBLE	1	0.0	1.0	-
constant	cNRFTAB	table with recovery fractions of fertiliser N applications	DOUBLEARRAY	1	-	-	-
constant	cNSLA	coefficient for the effect of nutrient (N-P-K) stress on SLA reduction	DOUBLE	1	-	-	0.5
constant	cPMAXSO	maximal P concentration in storage organs	DOUBLE	g/g	-	-	0.0026
constant	cPMINI	initial amount (at crop emergence) of potentially available soil P	DOUBLE	g/m2	-	-	0.0
constant	cPMXLV	table with maximal P concentration in leaves as function of DVS	DOUBLEARRAY	g/g	-	-	-
constant	cPMaxTableConcentration	Maximum P concentration in leaves as function of DVS (c.f. PMXLV)	DOUBLEARRAY	g/g	-	-	-
constant	cPMaxTableDVS	DVS for maximum P concentration in leaves (c.f. PMXLV)	DOUBLEARRAY	1	-	-	-
constant	cPRF	recovery fractions of fertiliser P applications	DOUBLE	1	0.0	1.0	-
constant	cPRFTAB	table with recovery fractions of fertiliser P applications	DOUBLEARRAY	1	-	-	-
constant	cRDI	Initial rooting depth	DOUBLE	m	-	-	10.0
constant	cRDRL	max. rel. death rate of leaves due to water stress	DOUBLE	d-1	-	-	0.05
constant	cRDRLTB	table with relative death rate of leaves vs. TMPA	DOUBLEARRAY	d-1	-	-	-
constant	cRDRLeavesTableMeanTemp	Daily mean temperature for relative death rate of leaves (c.f. RDRLTB)	DOUBLEARRAY	°C	-	-	-
constant	cRDRLeavesTableRelativeRate	Relative death rate of leaves as a function of daily mean temperature (c.f. RDRLTB)	DOUBLEARRAY	d-1	-	-	-
constant	cRDRNS	max. relative death rate of leaves due to nutrient (N-P-K) stress	DOUBLE	d-1	-	-	0.05
constant	cRDRRTB	table with relative death rate of roots vs. DVS	DOUBLEARRAY	d-1	-	-	-
constant	cRDRRootsTableDVS	DVS for relative death rate of stems (c.f. RDRRTB)	DOUBLEARRAY	1	-	-	-
constant	cRDRRootsTableRelativeRate	Relative death rate of stems as a function of DVS (c.f. RDRRTB)	DOUBLEARRAY	d-1	-	-	-
constant	cRDRSHM	rel. death rate of leaves due to shading (above LAICR)	DOUBLE	d-1	-	-	0.03
constant	cRDRSTB	table with relative death rate of stems vs. DVS	DOUBLEARRAY	d-1	-	-	-
constant	cRDRStemsTableDVS	DVS for relative death rate of roots (c.f. RDRSTB)	DOUBLEARRAY	1	-	-	-
constant	cRDRStemsTableRelativeRate	Relative death rate of roots as a function of DVS (c.f. RDRSTB)	DOUBLEARRAY	d-1	-	-	-
constant	cRGRLAI	maximal relative increase in LAI	DOUBLE	d-1	-	-	0.0
constant	cRKFLV	residual K concentration in leaves	DOUBLE	g/g	-	-	0.009
constant	cRKFRT	residual K concentration in roots	DOUBLE	g/g	-	-	0.005
constant	cRKFST	residual K concentration in stems	DOUBLE	g/g	-	-	0.005
constant	cRNFLV	residual N concentration in leaves	DOUBLE	g/g	-	-	0.004
constant	cRNFRT	residual N concentration in roots	DOUBLE	g/g	-	-	0.002
constant	cRNFST	residual N concentration in stems	DOUBLE	g/g	-	-	0.002
constant	cRPFLV	residual P concentration in leaves	DOUBLE	g/g	-	-	5.0E-4
constant	cRPFRT	residual P concentration in roots	DOUBLE	g/g	-	-	3.0E-4
constant	cRPFST	residual P concentration in stems	DOUBLE	g/g	-	-	3.0E-4
constant	cRRI	Maximum daily increase in rooting depth	DOUBLE	m/d	-	-	1.2
constant	cRTKMINS	fraction of soil K coming available per day	DOUBLE	d-1	-	-	0.0
constant	cRTNMINS	fraction of soil organic N coming available per day	DOUBLE	d-1	-	-	0.0
constant	cRTPMINS	fraction of soil P coming available per day	DOUBLE	d-1	-	-	0.0
constant	cRWRTI	initial change in living root biomass	DOUBLE	g/(m2 d)	-	-	0.0
constant	cRedistributionDelayTsum	Temperature sum causing the delay of dry matter redistribution (c.f. DELREDIST)	DOUBLE	°C d	-	-	12.0
constant	cRedistributionTsumMax	Maximum temperature sum accumulationto indicate the duration of dry matter redistribution (c.f. TSUMREDISTMAX)	DOUBLE	°C d	-	-	144.0
constant	cRootsPartitioningTableDVS	DVS for fraction of total dry matter to roots (c.f. FRTB)	DOUBLEARRAY	1	-	-	-
constant	cRootsPartitioningTableFraction	Fraction of total dry matter to roots as function of DVS (c.f. FRTB)	DOUBLEARRAY	1	0.0	1.0	-
constant	cSLATB	table of specific leaf area as dependent on DVS	DOUBLEARRAY	m2/g	-	-	-
constant	cSLATableDVS	DVS for specific leaf area (c.f. SLATB)	DOUBLEARRAY	1	-	-	-
constant	cSLATableSLA	Specific leaf area as function of DVS (c.f. SLATB)	DOUBLEARRAY	m2/g	-	-	-
constant	cSMW	Water content at wilting point (c.f. WCWP)	DOUBLE	m3/m3	-	-	0.12
constant	cSMWET	Water content at wet (c.f. WCWET)	DOUBLE	m3/m3	-	-	0.46
constant	cScaleFactorFERK	Scales the y-values of FERKTAB (for sensitivity analysis / calibration)	DOUBLE	1	-	-	1.0
constant	cScaleFactorFERN	Scales the y-values of FERNTAB (for sensitivity analysis / calibration)	DOUBLE	1	-	-	1.0
constant	cScaleFactorFERP	Scales the y-values of FERPTAB (for sensitivity analysis / calibration)	DOUBLE	1	-	-	1.0
constant	cScaleFactorKDIF	Scales the y-values of KDIFTB (for sensitivity analysis / calibration)	DOUBLE	1	-	-	1.0
constant	cScaleFactorSLA	Scales the y-values of SLATB (for sensitivity analysis / calibration)	DOUBLE	1	-	-	1.0
constant	cStemsPartitioningTableDVS	DVS for fraction of above-ground dry matter to stems (c.f. FSTB)	DOUBLEARRAY	1	-	-	-
constant	cStemsPartitioningTableFraction	Fraction of above-ground dry matter to stems as function of DVS (c.f. FSTB)	DOUBLEARRAY	1	0.0	1.0	-
constant	cStorageOrgansPartitioningTableDVS	DVS for fraction of above-ground dry matter to storage organs (c.f. FOTB)	DOUBLEARRAY	1	-	-	-
constant	cStorageOrgansPartitioningTableFraction	Fraction of above-ground dry matter to storage organs as function of DVS (c.f. FOTB)	DOUBLEARRAY	1	0.0	1.0	-
constant	cStorageOrgansRedistributionRate	Rate of redistribution of dry matter from storage roots to leaves(c.f.RRREDISTSO)	DOUBLE	d-1	-	-	0.01
constant	cStorageOrgansToLeavesFraction	Conversion rate of storage organs dry matter to leaf dry matter (c.f. SO2LV)	DOUBLE	1	-	-	0.8
constant	cTBASE	lower threshold temperature for LAI increase	DOUBLE	°C	-	-	0.0
constant	cTCKT	time constant for K translocation to storage organs	DOUBLE	d	-	-	10.0
constant	cTCNT	time constant for N translocation to storage organs	DOUBLE	d	-	-	10.0
constant	cTCPT	time constant for P translocation to storage organs	DOUBLE	d	-	-	10.0
constant	cTWCSD	Proportion of WCWP at which water content at severe drough is assumed to be reached (unitless, default value set at 5%b above WCWP)	DOUBLE	1	-	-	1.05
constant	cWLVNew	Minimun amount of new leaves weight produced in the redistribution phase (WLVGNEWN)	DOUBLE	g/m2	-	-	10.0
constant	cWSORedistributionFractionMax	Maximum proportion of dry matter redistribution from storage roots for the formation of new leaves (c.f. WSOREDISTFRACMAX)	DOUBLE	1	-	-	0.05
input	iAVRAD	Daily total irradiation	DOUBLE	J/(m2 d)	-	-	0.0
input	iDVS	initial development stage of crop (from 0 to 2)	DOUBLE	1	-	-	0.0
input	iDoHarvest	harvesting	BOOLEAN	1	-	-	false
input	iDoSow	sowing	BOOLEAN	1	-	-	false
input	iEMERG	has emerged	BOOLEAN	1	-	-	false
input	iFERK	fertiliser K applications	DOUBLE	g/(m2 d)	0.0	-	-
input	iFERN	fertiliser N applications	DOUBLE	g/(m2 d)	0.0	-	-
input	iFERP	fertiliser P applications	DOUBLE	g/(m2 d)	0.0	-	-
input	iHasBranched	True if plant has branched	BOOLEAN		-	-	false
input	iIDEMERG	Day of emergence	INT	1	-	-	0
input	iLeaveSenescenceHeatStressFactor	Factor that increases leaf senescence due to heat stress	DOUBLE	1	0.0	-	1.0
input	iRDM	maximal rooting depth	DOUBLE	m	-	-	0.0
input	iRTMCO	overall correction factor for RUE in dependence of both CO2 concentration and non-optimal daytime and minimal temperatures	DOUBLE	1	-	-	0.0
input	iRUE	radiation use efficiency	DOUBLE	g/MJ	-	-	0.0
input	iSMACT	Actual volumetric soil water content	DOUBLE	m3/m3	-	-	0.0
input	iSMCR	Critical volumetric soil water content	DOUBLE	m3/m3	-	-	0.0
input	iTMAX	maximal air temperature during day (output of routine WEATHR)	DOUBLE	°C	-	-	0.0
input	iTMIN	minimal air temperature during day (output of routine WEATHR)	DOUBLE	°C	-	-	0.0
input	iTRANRF	water stress reduction factor	DOUBLE	1	-	-	1.0
state	sAKLV	amount of K in living leaves	DOUBLE	g/m2	-	-	0.0
state	sAKRT	amount of K in living roots	DOUBLE	g/m2	-	-	0.0
state	sAKSO	amount of K in storage organs	DOUBLE	g/m2	-	-	0.0
state	sAKST	amount of K in living stems	DOUBLE	g/m2	-	-	0.0
state	sANLV	amount of N in living leaves	DOUBLE	g/m2	-	-	0.0
state	sANRT	amount of N in living roots	DOUBLE	g/m2	-	-	0.0
state	sANSO	amount of N in storage organs	DOUBLE	g/m2	-	-	0.0
state	sANST	amount of N in living stems	DOUBLE	g/m2	-	-	0.0
state	sAPLV	amount of P in living leaves	DOUBLE	g/m2	-	-	0.0
state	sAPRT	amount of P in living roots	DOUBLE	g/m2	-	-	0.0
state	sAPSO	amount of P in storage organs	DOUBLE	g/m2	-	-	0.0
state	sAPST	amount of P in living stems	DOUBLE	g/m2	-	-	0.0
state	sCutting	Average weight per cutting (c.f. WCUTTING)	DOUBLE	g/m2	-	-	0.0
state	sDeadLeavesReallocation	Reallocation of dead leaves(c.f. WSOFASTRANSLSO)	DOUBLE	g/m2	-	-	0.0
state	sDormancyDuration	Duration of dormacy in days (c.f. DURDORM)	DOUBLE	d	-	-	0.0
state	sDormancyRecoverTsum	Temperature sum above which crop recovers from dormacy (c.f. PUSHDORMRECTSUM)	DOUBLE	°C d	-	-	0.0
state	sDormancyTsum	Temperature sum at dormacy (c.f. DORMTSUM)	DOUBLE	°C d	-	-	0.0
state	sGTSUM	total biomass of the crop	DOUBLE	g/m2	-	-	0.0
state	sKLIVT	amount of K in living crop organs	DOUBLE	g/m2	-	-	0.0
state	sKLOSSL	amount of K in dead leaves	DOUBLE	g/m2	-	-	0.0
state	sKLOSSR	amount of K in dead roots	DOUBLE	g/m2	-	-	0.0
state	sKLOSSS	amount of K in dead stems	DOUBLE	g/m2	-	-	0.0
state	sKLOSST	amount of K in dead crop organs	DOUBLE	g/m2	-	-	0.0
state	sKMIN	amount of K potentially available from the soil	DOUBLE	g/m2	-	-	0.0
state	sKMINT	total K directly available from soil and fertiliser	DOUBLE	g/m2	-	-	0.0
state	sKROOT	total K in living and dead roots	DOUBLE	g/m2	-	-	0.0
state	sKUPTT	total K uptake by crop from soil	DOUBLE	g/m2	-	-	0.0
state	sLAI	leaf area index (leaf area per soil surface)	DOUBLE	m2/m2	-	-	0.0
state	sLeafAgeTsum	Temperature sum to calculate leaf age (c.f. TSUMCROPLEAFAGE)	DOUBLE	°C d	-	-	0.0
state	sMaintainanceLossRedistribution	Dry matter that is lost during redistribution for the maintainance process (c.f. REDISTMAINLOSSCUMUL)	DOUBLE	g/m2	-	-	0.0
state	sNFIXTT	total N uptake by crop from biological fixation	DOUBLE	g/m2	-	-	0.0
state	sNLIVT	amount of N in living crop organs	DOUBLE	g/m2	-	-	0.0
state	sNLOSSL	amount of N in dead leaves	DOUBLE	g/m2	-	-	0.0
state	sNLOSSR	amount of N in dead roots	DOUBLE	g/m2	-	-	0.0
state	sNLOSSS	amount of N in dead stems	DOUBLE	g/m2	-	-	0.0
state	sNLOSST	amount of N in dead crop organs	DOUBLE	g/m2	-	-	0.0
state	sNMIN	organic N potentially available by mineralization from the soil	DOUBLE	g/m2	-	-	0.0
state	sNMINT	total mineral N directly available from soil and fertiliser	DOUBLE	g/m2	-	-	0.0
state	sNROOT	total N in living and dead roots	DOUBLE	g/m2	-	-	0.0
state	sNUPTT	total N uptake by crop from soil	DOUBLE	g/m2	-	-	0.0
state	sPLIVT	amount of P in living crop organs	DOUBLE	g/m2	-	-	0.0
state	sPLOSSL	amount of P in dead leaves	DOUBLE	g/m2	-	-	0.0
state	sPLOSSR	amount of P in dead roots	DOUBLE	g/m2	-	-	0.0
state	sPLOSSS	amount of P in dead stems	DOUBLE	g/m2	-	-	0.0
state	sPLOSST	amount of P in dead crop organs	DOUBLE	g/m2	-	-	0.0
state	sPMIN	P potentially available from the soil	DOUBLE	g/m2	-	-	0.0
state	sPMINT	total P directly available from soil and fertiliser	DOUBLE	g/m2	-	-	0.0
state	sPROOT	total P in living and dead roots	DOUBLE	g/m2	-	-	0.0
state	sPUPTT	total P uptake by crop from soil	DOUBLE	g/m2	-	-	0.0
state	sRD	actual rooting depth	DOUBLE	m	-	-	0.0
state	sRedistributionEndTsum	Temperature sum to indicate the end of dry matter redistribution(c.f. PUSHREDISTENDTSUM)	DOUBLE	°C d	-	-	0.0
state	sRedistributionTsum	Temperature sum to indicate the duration of dry matter redistribution (c.f. PUSHREDISTSUM)	DOUBLE	°C d	-	-	0.0
state	sTAGB	total above-ground biomass	DOUBLE	g/m2	-	-	0.0
state	sTAGBG	-	DOUBLE	g/m2	-	-	0.0
state	sTPAR	total photosynthetically active radiation	DOUBLE	MJ/m2	-	-	0.0
state	sTPARINT	total intercepted radiation (PAR)	DOUBLE	MJ/m2	-	-	0.0
state	sWLV	weight of leaves	DOUBLE	g/m2	-	-	0.0
state	sWLVD	weight of dead leaves	DOUBLE	g/m2	-	-	0.0
state	sWLVG	weight of living leaves	DOUBLE	g/m2	-	-	0.0
state	sWLVRedistribution	New leaves weight produced in the redistribution phase (c.f. WLVREDISTCUMUL)	DOUBLE	g/m2	-	-	0.0
state	sWRT	weight of roots	DOUBLE	g/m2	-	-	0.0
state	sWRTD	weight of deat roots	DOUBLE	g/m2	-	-	0.0
state	sWSO	weight of storage organs	DOUBLE	g/m2	-	-	0.0
state	sWSORedistribution	Dry matter redistribution from storage roots for the formation of new leaves(c.f. WSOREDISTCUMUL)	DOUBLE	g/m2	-	-	0.0
state	sWST	weight of stems	DOUBLE	g/m2	-	-	0.0
state	sWSTD	weight of dead stems	DOUBLE	g/m2	-	-	0.0
rate	rCuttingRate	Rate of average weight per cutting (c.f. RWCUTTING)	DOUBLE	g/(m2 d)	-	-	0.0
rate	rDLV	decrease in leaf mass by senescence	DOUBLE	g/(m2 d)	-	-	0.0
rate	rDRRT	deat root rate	DOUBLE	g/(m2 d)	-	-	0.0
rate	rDRST	dead stem rate	DOUBLE	g/(m2 d)	-	-	0.0
rate	rDeadLeavesReallocationRate	Rate of reallocation of dead leaves(c.f. RWSOFASTRANSLSO)	DOUBLE	g/(m2 d)	-	-	0.0
rate	rDormancyDurationRate	Rate of duration of dormancy (c.f. RDORMTIME)	DOUBLE	1	-	-	0.0
rate	rDormancyRecoverTsumRate	Rate of temperature sum above which crop recovers from dormancy (c.f. RPUSHDORMRECTSUM)	DOUBLE	°C	-	-	0.0
rate	rDormancyTsumRate	Rate of temperature sum at dormancy (c.f. RDORMTSUM)	DOUBLE	°C	-	-	0.0
rate	rGRT	daily increase in total biomass of the crop	DOUBLE	g/(m2 d)	-	-	0.0
rate	rKUPTR	daily K uptake rate by the crop	DOUBLE	g/(m2 d)	-	-	0.0
rate	rLeafAgeTsumRate	Rate of temperature sum to calculate the leaf age (c.f. RTSUMCROPLEAFAGE)	DOUBLE	°C	-	-	0.0
rate	rMaintainanceLossRedistributionRate	Rate of dry matter that is lost during redistribution for the maintainance process (c.f. RREDISTMAINTLOSS)	DOUBLE	g/(m2 d)	-	-	0.0
rate	rNFIXTR	N uptake rate by crop from biological fixation	DOUBLE	g/(m2 d)	-	-	0.0
rate	rNUPTR	daily N uptake rate by the crop	DOUBLE	g/(m2 d)	-	-	0.0
rate	rPAR	daily amount of photosynthetically active radiation	DOUBLE	MJ/(m2 d)	-	-	0.0
rate	rPARINT	(or PARAB) daily amount of PAR as intercepted by the crop canopy	DOUBLE	MJ/(m2 d)	-	-	0.0
rate	rPUPTR	daily P uptake rate by the crop	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRKLDLV	K losses due to death of leaves	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRKLDRT	K losses due to death of roots	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRKLDST	K losses due to death of stems	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRKLV	rate of change of K amount in the leaves	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRKMINS	depletion (thus negative value) of the available amount of soil K	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRKMINT	change in total directly available K in soil	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRKRT	rate of change of K amount in the roots	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRKSO	rate of change of K amount in the storage organs	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRKST	rate of change of K amount in the stems	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRLAI	change in leaf area index	DOUBLE	d-1	-	-	0.0
rate	rRNLDLV	N losses due to death of leaves	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRNLDRT	N losses due to death of roots	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRNLDST	N losses due to death of stems	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRNLV	rate of change of N amount in the leaves	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRNMINS	depletion (thus negative value)/mineralization of the available amount of soil organic N	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRNMINT	change in total inorganic directly available N in soil	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRNRT	rate of change of N amount in the roots	DOUBLE	J/(m2 d)	-	-	0.0
rate	rRNSO	actual N translocation to storage organs	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRNST	rate of change of N amount in the stems	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRPLDLV	P losses due to death of leaves	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRPLDRT	P losses due to death of roots	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRPLDST	P losses due to death of stems	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRPLV	rate of change of P amount in the leaves	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRPMINS	depletion (thus negative value) of the available amount of soil P	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRPMINT	change in total directly available P in soil	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRPRT	rate of change of P amount in the roots	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRPSO	actual P translocation to storage organs	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRPST	rate of change of P amount in the stems	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRR	root growth rate	DOUBLE	m/d	-	-	0.0
rate	rRWLVG	change in living leaf biomass	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRWRT	change in living root biomass	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRWSO	change in storage organ biomass	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRWST	change in living stem biomass	DOUBLE	g/(m2 d)	-	-	0.0
rate	rRedistributionEndTsumRate	Rate of temperature sum to indicate the end of dry matter redistribution(c.f. RPUSHREDISTENDTSUM)	DOUBLE	°C	-	-	0.0
rate	rRedistributionTsumRate	Rate of temperature sum to indicate the duration of dry matter redistribution (c.f. RPUSHREDISTSUM)	DOUBLE	°C	-	-	0.0
rate	rWLVRedistributionRate	Rate of new leaves weight produced in the redistribution phase (c.f. RREDISTLVG)	DOUBLE	g/(m2 d)	-	-	0.0
rate	rWSORedistributionRate	Rate of dry matter redistribution from storage roots for the formation of new leaves(c.f. RREDISTSO)	DOUBLE	g/(m2 d)	-	-	0.0
out	FINT	fractional light interception	DOUBLE		-	-	0.0
out	IsDormancy	True if dormancy has started (c.f. DORMANCY)	BOOLEAN		-	-	false
out	IsDormancyRecover	True if dormancy recover has started (c.f. PUSHDORMREC)	BOOLEAN		-	-	false
out	IsRedistribution	True if redistribution has started (c.f. PUSHREDIST)	BOOLEAN		-	-	false
out	IsRedistributionEnd	True if redistribution ended (c.f. PUSHREDISTEND)	BOOLEAN		-	-	false
out	KDEML	K demand of leaves	DOUBLE	g/m2	-	-	0.0
out	KDEMR	K demand of roots	DOUBLE	g/m2	-	-	0.0
out	KDEMS	K demand of stems	DOUBLE	g/m2	-	-	0.0
out	KDEMSO	K demand of storage organs	DOUBLE	g/m2	-	-	0.0
out	KDEMTO	K demand of leaves, stems and roots	DOUBLE	g/m2	-	-	0.0
out	KNI	-	DOUBLE	1	-	-	1.0
out	LAII	-	DOUBLE	m2/m2	-	-	0.0
out	NDEML	N demand of leaves	DOUBLE	g/m2	-	-	0.0
out	NDEMR	N demand of roots	DOUBLE	g/m2	-	-	0.0
out	NDEMS	N demand of stems	DOUBLE	g/m2	-	-	0.0
out	NDEMSO	N demand of storage organs	DOUBLE	g/m2	-	-	0.0
out	NDEMTO	N demand of leaves, stems and roots	DOUBLE	g/m2	-	-	0.0
out	NLIMIT	Nutrient uptake limiting factor (-) at low moisture conditions in the rooted soil layer before anthesis.	DOUBLE	1	-	-	0.0
out	NNI	-	DOUBLE	1	-	-	1.0
out	NPKI	-	DOUBLE	1	-	-	1.0
out	PDEML	P demand of leaves	DOUBLE	g/m2	-	-	0.0
out	PDEMR	P demand of roots	DOUBLE	g/m2	-	-	0.0
out	PDEMS	P demand of stems	DOUBLE	g/m2	-	-	0.0
out	PDEMSO	P demand of storage organs	DOUBLE	g/m2	-	-	0.0
out	PDEMTO	P demand of leaves, stems and roots	DOUBLE	g/m2	-	-	0.0
out	PNI	-	DOUBLE	1	-	-	1.0
out	WithCrop	crop is present	BOOLEAN	1	-	-	false

Nested Class Summary

Nested classes/interfaces inherited from class net.simplace.sim.model.FWSimComponent

net.simplace.sim.model.FWSimComponent.TEST_STATE

Field Summary

Fields inherited from class net.simplace.sim.model.FWSimComponent

iFieldMap, iFrequence, iInputMap, iJexlRule, iMasterComponentGroup, iName, iOrderNumber, isComponentGroup, iSimComponentElement, iSimModel, iVarMap

Constructor Summary

Constructors

Constructor	Description
Lintul5Cassava()	Empty constructor used by class.forName()
Lintul5Cassava(String aName, HashMap<String,net.simplace.sim.util.FWSimVariable<?>> aFieldMap, HashMap<String,String> aInputMap, org.jdom2.Element aSimComponentElement, net.simplace.sim.util.FWSimVarMap aVarMap, int aOrderNumber)

Method Summary

Modifier and Type	Method	Description
protected net.simplace.sim.model.FWSimComponent	clone(net.simplace.sim.util.FWSimVarMap aVarMap)	creates a clone from this SimComponent for use in other threads
HashMap<String,net.simplace.sim.util.FWSimVariable<?>>	createVariables()	Create the FWSimVariables as interface for this SimComponent
HashMap<String,net.simplace.sim.util.FWSimVariable<?>>	fillTestVariables(int aParamIndex, net.simplace.sim.model.FWSimComponent.TEST_STATE aDefineOrCheck)	called for single component test to check the components algorithm.
protected void	init()	initializes the fields by getting input and output FWSimVariables from VarMap
protected void	initValues()
protected void	process()	process the algorithm and write the results back to VarMap
protected void	resetOnHarvest()

Methods inherited from class net.simplace.sim.model.FWSimComponent

addVariable, bind, checkCondition, createSimComponent, createSimComponent, createSimComponent, createSimComponent, doProcess, getConstantVariables, getContentType, getCreateFormXML, getDescription, getEditFormXML, getFieldMap, getFrequence, getFrequenceRuleScript, getInputs, getInputVariables, getMasterComponentGroup, getName, getOrderNumber, getOutputVariables, getVariable, getVariableField, getVarMap, initialize, isConditionCheck, isVariableAvailable, performLinks, performLinks, readInputs, removeVariable, reset, runComponentTest, setVariablesDefault, toComponentLinkingXML, toDocXML, toGroupXML, toOutputDefinitionXML, toResourcesDataXML, toResourcesDefinitionXML, toString, toXML, writeVarInfos

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

Lintul5Cassava

public Lintul5Cassava(String aName,
 HashMap<String,net.simplace.sim.util.FWSimVariable<?>> aFieldMap,
 HashMap<String,String> aInputMap,
 org.jdom2.Element aSimComponentElement,
 net.simplace.sim.util.FWSimVarMap aVarMap,
 int aOrderNumber)

Parameters:

aName -

aFieldMap -

aInputMap -

aSimComponentElement -

aVarMap -

aOrderNumber -

Lintul5Cassava

public Lintul5Cassava()

Empty constructor used by class.forName()

Method Details

createVariables

public HashMap<String,net.simplace.sim.util.FWSimVariable<?>> createVariables()

Create the FWSimVariables as interface for this SimComponent

Specified by:

createVariables in interface net.simplace.sim.util.FWSimFieldContainer

Specified by:

createVariables in class net.simplace.sim.model.FWSimComponent

See Also:

• FWSimComponent.createVariables()

init

protected void init()

initializes the fields by getting input and output FWSimVariables from VarMap

Specified by:

init in class net.simplace.sim.model.FWSimComponent

See Also:

• FWSimComponent.init()

initValues

protected void initValues()

resetOnHarvest

protected void resetOnHarvest()

process

protected void process()

process the algorithm and write the results back to VarMap

Specified by:

process in class net.simplace.sim.model.FWSimComponent

See Also:

• FWSimComponent.process()

fillTestVariables

public HashMap<String,net.simplace.sim.util.FWSimVariable<?>> fillTestVariables(int aParamIndex,
 net.simplace.sim.model.FWSimComponent.TEST_STATE aDefineOrCheck)

called for single component test to check the components algorithm.

Specified by:

fillTestVariables in class net.simplace.sim.model.FWSimComponent

See Also:

• net.simplace.sim.util.FWSimFieldContainer#fillTestVariables(int aParamIndex, TEST_STATE aDefineOrCheck)

clone

protected net.simplace.sim.model.FWSimComponent clone(net.simplace.sim.util.FWSimVarMap aVarMap)

creates a clone from this SimComponent for use in other threads

Specified by:

clone in class net.simplace.sim.model.FWSimComponent

See Also:

• FWSimComponent.clone(net.simplace.sim.util.FWSimVarMap)