Class LintulFunctions

java.lang.Object
net.simplace.sim.components.models.lintul5.LintulFunctions
Direct Known Subclasses:
LintulCassavaFunctions

public class LintulFunctions extends Object
Implements functions for the model Lintul5. WIKI_START Algorithms are the same as in (L5). There are only technical changes due to translation from Fortran to JAVA and integration into Simplace Framework. Functions are called by the !SimComponent Lintul5. == References == - (L5) [http://models.pps.wur.nl/content/lintul-5-crop-growth-simulation-model-potential-water-limited-n-limited-and-npk-limited-co-0 LINTUL-5 Crop growth simulation model for potential, water-limited, N-limited and NPK-limited conditions] WIKI_END
Author:
G. Krauss
  • Nested Class Summary

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    Modifier and Type
    Class
    Description
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  • Constructor Summary

    Constructors
    Constructor
    Description
     
  • Method Summary

    Modifier and Type
    Method
    Description
    static double
    calculateNFixationFraction(double FixationRestrictionFactor, double DVS, double RootDepth, Double[] SoilLayerDepth, Double[] FieldCapacity, Double[] WiltingPoint, Double[] WaterContent, Double[] NitrogenContent)
    Calculate the fraction of N demand that is fullfilled by N fixation The fraction depends on development, soil water content in the upper 30cm and total N content in the rooted zone.
    DailyTotalIrradiation(int IDAY, double DAYL, double SINLD, double COSLD, double DTR)
    Computes daily total irradiation
    DeadRootsStemsRate(double DVS, double WRT, double WST, double RDRRT, double RDRST, double DVSDR)
    Computes the N/P/K losses due to death of leaves, stems and roots
    DEATHL(double DAY, boolean EMERG, double DVS, double DVSDLT, double RDRTMP, double RDRSHM, double RDRL, double TRANRF, double LAI, double LAICR, double WLVG, double RDRNS, double NPKI, double SLA, double HeatStressFactor)
    Computes the relative death rate (d-1) of leaves due to age, shading and drought and due to nutrient (NPK) stress and the death rate of leaves in total
    DEATHL(double DAY, boolean EMERG, double DVS, double DVSDLT, double RDRTMP, double RDRSHM, double RDRL, double TRANRF, double LAI, double LAICR, double WLVG, double RDRNS, double NPKI, double SLA, double HeatStressFactor, double DamageDeadLeavesRelativeRate)
    Computes the relative death rate (d-1) of leaves due to age, shading and drought and due to nutrient (NPK) stress and the death rate of leaves in total
    static double
    GLA(double DAY, boolean EMERG, double DTEFF, double LAII, double RGRLAI, double DELT, double SLA, double LAI, double GLV, double NLAI, double DVS, double TRANRF, double NPKI)
    Computes daily increase of leaf area index
    GROWTH(double DAY, boolean EMERG, double PAR, double KDIF, double NLUE, double LAI, double RUE, double RTMCO, double TRANRF, double NPKI)
    Computes the total growth rate
    NDEMND(double NMAXLV, double NMAXST, double NMAXRT, double NMAXSO, double WLVG, double WST, double WRT, double WSO, double PMAXLV, double PMAXST, double PMAXRT, double PMAXSO, double KMAXLV, double KMAXST, double KMAXRT, double KMAXSO, double ANLV, double ANST, double ANRT, double ANSO, double TCNT, double APLV, double APST, double APRT, double APSO, double TCPT, double AKLV, double AKST, double AKRT, double AKSO, double TCKT)
    Computes the N/P/K demands of crop organs
    NNINDX(double DAY, double DAYEM, boolean EMERG, int IOPT, double NFGMR, double NRMR, double NOPTMR, double PFGMR, double PRMR, double POPTMR, double KFGMR, double KRMR, double KOPTMR)
    Computes NPK and N/P/K Nutrition Indices
    NOPTM(double WLVG, double WST, double FRNX, double NMAXLV, double NMAXST, double FRPX, double PMAXLV, double PMAXST, double FRKX, double KMAXLV, double KMAXST)
    Computes the optimal N/P/K concentrations of crop organs
    NTRANS(double RNSO, double ATNLV, double ATNST, double ATNRT, double ATN, double RPSO, double ATPLV, double ATPST, double ATPRT, double ATP, double RKSO, double ATKLV, double ATKST, double ATKRT, double ATK)
    Computes the N/P/K translocated from different organs
    NTRLOC(double ANLV, double ANST, double ANRT, double WLVG, double WST, double WRT, double RNFLV, double RNFST, double RNFRT, double FNTRT, double APLV, double APST, double APRT, double AKLV, double AKST, double AKRT, double RPFLV, double RPFST, double RPFRT, double RKFLV, double RKFST, double RKFRT)
    Computes the translocatable N/P/K in the organs
    NUptake(boolean EMERG, int IOPT, double NLIMIT, double NFIXF, double NMINT, double PMINT, double KMINT, double NDEMSO, double PDEMSO, double KDEMSO, double NSUPSO, double PSUPSO, double KSUPSO, double NDEMTO, double PDEMTO, double KDEMTO)
    Computes NUptake
    PENMAN(double ALTI, double TMIN, double TMAX, double WIND, double VAP, double CO2Factor, double AVRAD, double ATMTR)
    This subroutine calculates atmospheric transmission, potential evaporation from a free water surface (E0), a bare soil surface (ES0) and the potential transpiration of a closed crop canopy (ET0); CO2 effect on crop transpiration is included.
    RELGR(double DAY, double DAYEM, boolean EMERG, double GRT, double FLV, double FRT, double FST, double FSO, double DLV, double DRRT, double DRST)
    Computes the relative growth rate of roots, leaves, stem and storage organs
    RemovedN(double ANFRT, double ANFLV, double ANFST, double ANFSO, double RNFRT, double RNFLV, double RNFST, double RemovedRWRT, double RemovedRWLVG, double RemovedRWST, double RemovedRWSO, double RemovedDRRT, double RemovedDLV, double RemovedDRST, double DLVToLitter, double DRSTToLitter)
    Computes N in remmoved biomass (dead and living)
    RemovedP(double APFRT, double APFLV, double APFST, double APFSO, double RPFRT, double RPFLV, double RPFST, double RemovedRWRT, double RemovedRWLVG, double RemovedRWST, double RemovedRWSO, double RemovedDRRT, double RemovedDLV, double RemovedDRST, double DLVToLitter, double DRSTToLitter)
    Computes P in removed biomass (dead and living)
    RNLD(double RNFLV, double DLV, double RNFRT, double RPFLV, double RPFRT, double RKFLV, double RKFRT, double RNFST, double RPFST, double RKFST, double DRRT, double DRST)
    Computes the N/P/K losses due to death of leaves, stems
    RNUSUB(double DAY, double DAYEM, boolean EMERG, double NDEML, double NDEMS, double NDEMR, double NUPTR, double PDEML, double PDEMS, double PDEMR, double PUPTR, double KDEML, double KDEMS, double KDEMR, double KUPTR, double NFIXTR, double NDEMTO, double PDEMTO, double KDEMTO)
    Computes the partitioning of the total N/P/K uptake rates (NUPTR,PUPTR,KUPTR) over leaves, stem, and roots
    SoilMineralKRates(boolean EMERG, double NLIMIT, Double FERK, Double KRF, double RTKMINS, double KMINI, double KMIN, double KUPTR)
     
    SoilNutrientRates(boolean EMERG, double NLIMIT, Double FERN, Double NRF, Double FERP, Double PRF, Double FERK, Double KRF, double RTNMINS, double RTPMINS, double RTKMINS, double NMINI, double PMINI, double KMINI, double NMIN, double PMIN, double KMIN, double NUPTR, double PUPTR, double KUPTR)
     
    SoilNutrientRates(boolean EMERG, double NLIMIT, Double FERN, Double NRF, Double FERP, Double PRF, Double FERK, Double KRF, double RTNMINS, double RTPMINS, double RTKMINS, double NMINI, double PMINI, double KMINI, double NMIN, double PMIN, double KMIN, double NUPTR, double PUPTR, double KUPTR, double ScaleFactorFERN, double ScaleFactorFERP, double ScaleFactorFERK)
     
    SUBPAR(double NPART, double TRANRF, double NNI, double FRTWET, double FLVT, double FSTT, double FSOT)
    Modification of dry matter partitioning to leaves, stems, roots and storage organs in dependence of water and N stress
    static double
    SWEAF(double ET0, double CGNR)
    Calculates the fraction of easily available soil water between fc and wp Chapter 20 in documentation WOFOST Version 4.1 (1988) The fraction of easily available soil water between field capacity and wilting point is a function of the potential evapotranspiration rate (for a closed canopy) in cm/day, ET0, and the crop group number, CGNR (from 1 (=drought-sensitive) to 5 (=drought-resistent)).

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
  • Constructor Details

    • LintulFunctions

      public LintulFunctions()
  • Method Details

    • NTRLOC

      public static LintulFunctions.NTRLOCResult NTRLOC(double ANLV, double ANST, double ANRT, double WLVG, double WST, double WRT, double RNFLV, double RNFST, double RNFRT, double FNTRT, double APLV, double APST, double APRT, double AKLV, double AKST, double AKRT, double RPFLV, double RPFST, double RPFRT, double RKFLV, double RKFST, double RKFRT)
      Computes the translocatable N/P/K in the organs
      Parameters:
      ANLV -
      ANST -
      ANRT -
      WLVG -
      WST -
      WRT -
      RNFLV -
      RNFST -
      RNFRT -
      FNTRT -
      APLV -
      APST -
      APRT -
      AKLV -
      AKST -
      AKRT -
      RPFLV -
      RPFST -
      RPFRT -
      RKFLV -
      RKFST -
      RKFRT -
      Returns:
    • NOPTM

      public static LintulFunctions.NOPTMResult NOPTM(double WLVG, double WST, double FRNX, double NMAXLV, double NMAXST, double FRPX, double PMAXLV, double PMAXST, double FRKX, double KMAXLV, double KMAXST)
      Computes the optimal N/P/K concentrations of crop organs
      Parameters:
      WLVG -
      WST -
      FRNX -
      NMAXLV -
      NMAXST -
      FRPX -
      PMAXLV -
      PMAXST -
      FRKX -
      KMAXLV -
      KMAXST -
      Returns:
    • NNINDX

      public static LintulFunctions.NNIINDXResult NNINDX(double DAY, double DAYEM, boolean EMERG, int IOPT, double NFGMR, double NRMR, double NOPTMR, double PFGMR, double PRMR, double POPTMR, double KFGMR, double KRMR, double KOPTMR)
      Computes NPK and N/P/K Nutrition Indices
      Parameters:
      DAY -
      DAYEM -
      EMERG -
      IOPT -
      NFGMR -
      NRMR -
      NOPTMR -
      PFGMR -
      PRMR -
      POPTMR -
      KFGMR -
      KRMR -
      KOPTMR -
      Returns:
    • DeadRootsStemsRate

      public static LintulFunctions.DeadRootsStemsRateResult DeadRootsStemsRate(double DVS, double WRT, double WST, double RDRRT, double RDRST, double DVSDR)
      Computes the N/P/K losses due to death of leaves, stems and roots
      Parameters:
      DVS -
      WRT -
      WST -
      RDRRT -
      RDRST -
      DVSDR -
      Returns:
    • RNLD

      public static LintulFunctions.RNLDResult RNLD(double RNFLV, double DLV, double RNFRT, double RPFLV, double RPFRT, double RKFLV, double RKFRT, double RNFST, double RPFST, double RKFST, double DRRT, double DRST)
      Computes the N/P/K losses due to death of leaves, stems
      Parameters:
      RNFLV -
      DLV -
      RNFRT -
      RPFLV -
      RPFRT -
      RKFLV -
      RKFRT -
      RNFST -
      RPFST -
      RKFST -
      DRRT -
      DRST -
      Returns:
    • RemovedN

      public static LintulFunctions.RemovedNResult RemovedN(double ANFRT, double ANFLV, double ANFST, double ANFSO, double RNFRT, double RNFLV, double RNFST, double RemovedRWRT, double RemovedRWLVG, double RemovedRWST, double RemovedRWSO, double RemovedDRRT, double RemovedDLV, double RemovedDRST, double DLVToLitter, double DRSTToLitter)
      Computes N in remmoved biomass (dead and living)
      Parameters:
      ANFRT -
      ANFLV -
      ANFST -
      ANFSO -
      RNFRT -
      RNFLV -
      RNFST -
      RemovedRWRT -
      RemovedRWLVG -
      RemovedRWST -
      RemovedRWSO -
      RemovedDRRT -
      RemovedDLV -
      RemovedDRST -
      Returns:
    • RemovedP

      public static LintulFunctions.RemovedPResult RemovedP(double APFRT, double APFLV, double APFST, double APFSO, double RPFRT, double RPFLV, double RPFST, double RemovedRWRT, double RemovedRWLVG, double RemovedRWST, double RemovedRWSO, double RemovedDRRT, double RemovedDLV, double RemovedDRST, double DLVToLitter, double DRSTToLitter)
      Computes P in removed biomass (dead and living)
      Parameters:
      APFRT -
      APFLV -
      APFST -
      APFSO -
      RPFRT -
      RPFLV -
      RPFST -
      RemovedRWRT -
      RemovedRWLVG -
      RemovedRWST -
      RemovedRWSO -
      RemovedDRRT -
      RemovedDLV -
      RemovedDRST -
      DLVToLitter -
      DRSTToLitter -
      Returns:
    • NDEMND

      public static LintulFunctions.NDEMNDResult NDEMND(double NMAXLV, double NMAXST, double NMAXRT, double NMAXSO, double WLVG, double WST, double WRT, double WSO, double PMAXLV, double PMAXST, double PMAXRT, double PMAXSO, double KMAXLV, double KMAXST, double KMAXRT, double KMAXSO, double ANLV, double ANST, double ANRT, double ANSO, double TCNT, double APLV, double APST, double APRT, double APSO, double TCPT, double AKLV, double AKST, double AKRT, double AKSO, double TCKT)
      Computes the N/P/K demands of crop organs
      Parameters:
      NMAXLV -
      NMAXST -
      NMAXRT -
      NMAXSO -
      WLVG -
      WST -
      WRT -
      WSO -
      PMAXLV -
      PMAXST -
      PMAXRT -
      PMAXSO -
      KMAXLV -
      KMAXST -
      KMAXRT -
      KMAXSO -
      ANLV -
      ANST -
      ANRT -
      ANSO -
      TCNT -
      APLV -
      APST -
      APRT -
      APSO -
      TCPT -
      AKLV -
      AKST -
      AKRT -
      AKSO -
      TCKT -
      Returns:
    • NUptake

      public static LintulFunctions.NUptakeResult NUptake(boolean EMERG, int IOPT, double NLIMIT, double NFIXF, double NMINT, double PMINT, double KMINT, double NDEMSO, double PDEMSO, double KDEMSO, double NSUPSO, double PSUPSO, double KSUPSO, double NDEMTO, double PDEMTO, double KDEMTO)
      Computes NUptake
      Parameters:
      EMERG -
      IOPT -
      NLIMIT -
      NFIXF -
      NMINT -
      PMINT -
      KMINT -
      NDEMSO -
      PDEMSO -
      KDEMSO -
      NSUPSO -
      PSUPSO -
      KSUPSO -
      NDEMTO -
      PDEMTO -
      KDEMTO -
      Returns:
    • NTRANS

      public static LintulFunctions.NTRANSResult NTRANS(double RNSO, double ATNLV, double ATNST, double ATNRT, double ATN, double RPSO, double ATPLV, double ATPST, double ATPRT, double ATP, double RKSO, double ATKLV, double ATKST, double ATKRT, double ATK)
      Computes the N/P/K translocated from different organs
      Parameters:
      RNSO -
      ATNLV -
      ATNST -
      ATNRT -
      ATN -
      RPSO -
      ATPLV -
      ATPST -
      ATPRT -
      ATP -
      RKSO -
      ATKLV -
      ATKST -
      ATKRT -
      ATK -
      Returns:
    • RNUSUB

      public static LintulFunctions.RNUSUBResult RNUSUB(double DAY, double DAYEM, boolean EMERG, double NDEML, double NDEMS, double NDEMR, double NUPTR, double PDEML, double PDEMS, double PDEMR, double PUPTR, double KDEML, double KDEMS, double KDEMR, double KUPTR, double NFIXTR, double NDEMTO, double PDEMTO, double KDEMTO)
      Computes the partitioning of the total N/P/K uptake rates (NUPTR,PUPTR,KUPTR) over leaves, stem, and roots
      Parameters:
      DAY -
      DAYEM -
      EMERG -
      NDEML -
      NDEMS -
      NDEMR -
      NUPTR -
      PDEML -
      PDEMS -
      PDEMR -
      PUPTR -
      KDEML -
      KDEMS -
      KDEMR -
      KUPTR -
      NFIXTR -
      NDEMTO -
      PDEMTO -
      KDEMTO -
      Returns:
    • SoilNutrientRates

      public static LintulFunctions.SoilNutrientRatesResult SoilNutrientRates(boolean EMERG, double NLIMIT, Double FERN, Double NRF, Double FERP, Double PRF, Double FERK, Double KRF, double RTNMINS, double RTPMINS, double RTKMINS, double NMINI, double PMINI, double KMINI, double NMIN, double PMIN, double KMIN, double NUPTR, double PUPTR, double KUPTR)
    • SoilNutrientRates

      public static LintulFunctions.SoilNutrientRatesResult SoilNutrientRates(boolean EMERG, double NLIMIT, Double FERN, Double NRF, Double FERP, Double PRF, Double FERK, Double KRF, double RTNMINS, double RTPMINS, double RTKMINS, double NMINI, double PMINI, double KMINI, double NMIN, double PMIN, double KMIN, double NUPTR, double PUPTR, double KUPTR, double ScaleFactorFERN, double ScaleFactorFERP, double ScaleFactorFERK)
    • SoilMineralKRates

      public static LintulFunctions.SoilMineralRatesResult SoilMineralKRates(boolean EMERG, double NLIMIT, Double FERK, Double KRF, double RTKMINS, double KMINI, double KMIN, double KUPTR)
    • SUBPAR

      public static LintulFunctions.SUBPARResult SUBPAR(double NPART, double TRANRF, double NNI, double FRTWET, double FLVT, double FSTT, double FSOT)
      Modification of dry matter partitioning to leaves, stems, roots and storage organs in dependence of water and N stress
      Parameters:
      NPART -
      TRANRF -
      NNI -
      FRTWET -
      FLVT -
      FSTT -
      FSOT -
      Returns:
    • GROWTH

      public static LintulFunctions.GROWTHResult GROWTH(double DAY, boolean EMERG, double PAR, double KDIF, double NLUE, double LAI, double RUE, double RTMCO, double TRANRF, double NPKI)
      Computes the total growth rate
      Parameters:
      DAY -
      EMERG -
      PAR -
      KDIF -
      NLUE -
      LAI -
      RUE -
      RTMCO -
      TRANRF -
      NPKI -
      Returns:
    • DEATHL

      public static LintulFunctions.DEATHLResult DEATHL(double DAY, boolean EMERG, double DVS, double DVSDLT, double RDRTMP, double RDRSHM, double RDRL, double TRANRF, double LAI, double LAICR, double WLVG, double RDRNS, double NPKI, double SLA, double HeatStressFactor)
      Computes the relative death rate (d-1) of leaves due to age, shading and drought and due to nutrient (NPK) stress and the death rate of leaves in total
      Parameters:
      DAY -
      EMERG -
      DVS -
      DVSDLT -
      RDRTMP -
      RDRSHM -
      RDRL -
      TRANRF -
      LAI -
      LAICR -
      WLVG -
      RDRNS -
      NPKI -
      SLA -
      HeatStressFactor -
      Returns:
    • DEATHL

      public static LintulFunctions.DEATHLResult DEATHL(double DAY, boolean EMERG, double DVS, double DVSDLT, double RDRTMP, double RDRSHM, double RDRL, double TRANRF, double LAI, double LAICR, double WLVG, double RDRNS, double NPKI, double SLA, double HeatStressFactor, double DamageDeadLeavesRelativeRate)
      Computes the relative death rate (d-1) of leaves due to age, shading and drought and due to nutrient (NPK) stress and the death rate of leaves in total
      Parameters:
      DAY -
      EMERG -
      DVS -
      DVSDLT -
      RDRTMP -
      RDRSHM -
      RDRL -
      TRANRF -
      LAI -
      LAICR -
      WLVG -
      RDRNS -
      NPKI -
      SLA -
      HeatStressFactor -
      DamageDeadLeavesRelativeRate -
      Returns:
    • GLA

      public static double GLA(double DAY, boolean EMERG, double DTEFF, double LAII, double RGRLAI, double DELT, double SLA, double LAI, double GLV, double NLAI, double DVS, double TRANRF, double NPKI)
      Computes daily increase of leaf area index
      Parameters:
      DAY -
      EMERG -
      DTEFF -
      LAII -
      RGRLAI -
      DELT -
      SLA -
      LAI -
      GLV -
      NLAI -
      DVS -
      TRANRF -
      NPKI -
      Returns:
      GLAI
    • RELGR

      public static LintulFunctions.RELGRResult RELGR(double DAY, double DAYEM, boolean EMERG, double GRT, double FLV, double FRT, double FST, double FSO, double DLV, double DRRT, double DRST)
      Computes the relative growth rate of roots, leaves, stem and storage organs
      Parameters:
      DAY -
      DAYEM -
      EMERG -
      GRT -
      FLV -
      FRT -
      FST -
      FSO -
      DLV -
      DRRT -
      DRST -
      Returns:
    • DailyTotalIrradiation

      public static LintulFunctions.DailyTotalIrradiationResult DailyTotalIrradiation(int IDAY, double DAYL, double SINLD, double COSLD, double DTR)
      Computes daily total irradiation
      Parameters:
      IDAY -
      DAYL -
      SINLD -
      COSLD -
      DTR -
      Returns:
      DailyTotalIrradiationResult with AVRAD and ATMTR
    • PENMAN

      public static LintulFunctions.PENMANResult PENMAN(double ALTI, double TMIN, double TMAX, double WIND, double VAP, double CO2Factor, double AVRAD, double ATMTR)
      This subroutine calculates atmospheric transmission, potential evaporation from a free water surface (E0), a bare soil surface (ES0) and the potential transpiration of a closed crop canopy (ET0); CO2 effect on crop transpiration is included. Author : Daniel van Kraalingen, based on an earlier version written by: Kees van Diepen and Gert-Jan Nooy
      Parameters:
      ALTI - Altitude (m)
      TMIN - Minimum temperature during day (C)
      TMAX - Maximum temperature during day (C)
      WIND - Average windspeed (m s-1)
      VAP - Vapour pressure (mbar)
      CO2Factor - factor to correct ET0 regarding to CO2 concetration
      AVRAD - Daily total irradiation (J m-2 d-1)
      ATMTR -
      Returns:
      PENMANResult
    • SWEAF

      public static double SWEAF(double ET0, double CGNR)
      Calculates the fraction of easily available soil water between fc and wp Chapter 20 in documentation WOFOST Version 4.1 (1988) The fraction of easily available soil water between field capacity and wilting point is a function of the potential evapotranspiration rate (for a closed canopy) in cm/day, ET0, and the crop group number, CGNR (from 1 (=drought-sensitive) to 5 (=drought-resistent)). The function SWEAF describes this relationship given in tabular form by Doorenbos & Kassam (1979) and by Van Keulen & Wolf (1986; p.108, table 20). Authors: D.M. Jansen and C.A. van Diepen, October 1986.
      Parameters:
      ET0 -
      CGNR -
      Returns:
      the fraction of easily available soil water between fc and wp
    • calculateNFixationFraction

      public static double calculateNFixationFraction(double FixationRestrictionFactor, double DVS, double RootDepth, Double[] SoilLayerDepth, Double[] FieldCapacity, Double[] WiltingPoint, Double[] WaterContent, Double[] NitrogenContent)
      Calculate the fraction of N demand that is fullfilled by N fixation The fraction depends on development, soil water content in the upper 30cm and total N content in the rooted zone. The FixationRestrictionFactor controls how much these conditions influence the fraction. See: Williams and Izaurralde, The Apex Model, Equation 288 and 288a-288i
      Parameters:
      FixationRestrictionFactor -
      DVS - development stage
      RootDepth - root depth
      SoilLayerDepth - bottom depth of all soil layers
      FieldCapacity - field capacity per soil layers
      WaterContent - water content per soil layers
      NitrogenContent - nitrogen content per soil layers
      Returns: