Package net.simplace.sim.components.experimental.lintulcc

Class LintulCCDiurnalCropOzone

java.lang.Object

net.simplace.sim.model.FWSimComponent

net.simplace.sim.components.experimental.lintulcc.LintulCCDiurnalCropOzone

All Implemented Interfaces:

net.simplace.sim.util.FWSimFieldContainer

public class LintulCCDiurnalCropOzone
extends net.simplace.sim.model.FWSimComponent

LintulCC - Calculates Biomass by photosynthesis by considering ozone effect .

This SimComponent simulates photosynthesis, stomatal conductance, water flux, and crop growth using crop growth modules from LintulCC with futher consideration of troposphere ozone effects on crop growth and yield production.

This SimComponent is similar to LintulCC, except:

• photosynthesis and stomatal conductance are simulated at true hourly time step with the hourly input data (see TOTASSDiurnal) but other processes like water balance and crop growth are remaining at daily scale
• potential evapotranspiration is calculated for all days without water stress (fwat = 1) (using TOTASS_potential for potential canopy resistance). Actual daily water stress (fwat) is updated then imposes on photosynthesis, stomatal conductance and crop growth;
• calculation of ozone flux uptake is introduced to the existing photosynthesis and stomatal conductance models; and
• ozone stress functions (instantaneous and accumulated effects of ozone stress on photosynthesis and leaf growth are introduced following approach from Ewert and Porter (2000).

Further detail information from ozone flux model and ozone stress function could be found in Feng et al., (2022) and in Chapter 5 of the LintulCC and Extensions documentation (pdf).

References

Ewert F., Porter J.R. 2000. Ozone effects on wheat in relation to CO2: modelling short-term and long-term responses of leaf photosynthesis and leaf duration. Glob Chang Biol 6: 735-750. https://doi.org/10.1046/j.1365-2486.2000.00351.x

Feng Y., Nguyen H.T., Alam M. S., Emberson L., Gaiser T., Ewert F., Frei M., 2022. Identifying and modelling key physiological traits that confer tolerance or sensitivity to ozone in winter wheat (304) https://doi.org/10.1016/j.envpol.2022.119251

Author:

G. Krauss, Thuy Nguyen

Component Variables

Content Type	Name	Description	Data Type	Unit	Min Value	Max Value	Default Value
constant	cA	Parameter in the Angtrom formular	DOUBLE	1	-	-	1.35
constant	cB	Parameter in the Angtrom formular	DOUBLE	1	-	-	-0.35
constant	cCO2A	Atmospheric CO2 concentration	DOUBLE	μmol/mol	-	-	0.0
constant	cCiCaRatio	Ratio of intercellular CO2 concentration and atmospheric CO2 concentration	DOUBLE	1	-	-	0.7
constant	cCummulativeOzoneMinThresholdPhotosyn	Minimal threshold of cummulative ozone for photosynthesis	DOUBLE	nmol m-2	-	-	20000.0
constant	cCummulativeOzoneMinThresholdSenescence	Minimal threshold of cummulative ozone for leaf senescence	DOUBLE	nmol m-2	-	-	10000.0
constant	cD0	Sensivitity parameter of stomata to vapor pressure deficit	DOUBLE	Pa	-	-	2000.0
constant	cDOYEM	Day of year of crop emergency. If not set, then emergence will occur on the DOY where iDoSow is true.	INT	d	-	-	-
constant	cDOZA	Ozone short-term damage coefficient (intercept)	DOUBLE	1	-	-	0.06
constant	cDOZB	Ozone short-term damage coefficient (slope)	DOUBLE	(nmol m-2 s-1)-1	-	-	0.0045
constant	cDOZC	Ozone long-term damage coefficient on photosynthesis (default 0 -> no effect)	DOUBLE	(nmol m-2)-1	0.0	1.0	0.0
constant	cDOZD	Ozone long-term damage coefficient on leaf senescence (default 0 -> no effect)	DOUBLE	(nmol m-2)-1	0.0	1.0	0.0
constant	cEAKMC	Energy activation for Michaelis-mentent constant for CO2	DOUBLE	J mol-1	-	-	79430.0
constant	cEAKMO	Energy activation for Michaelis-mentent constant for CO2	DOUBLE	J mol-1	-	-	36380.0
constant	cEAVCMX	Energy activation for maximimum carboxylation rate of Rubisc	DOUBLE	J mol-1	-	-	65330.0
constant	cGAMmaxLowerLimit	Minimum value for CO2 compensation point	DOUBLE	μmol/mol	-	-	3.0
constant	cGFDUR	Thermal time time of grain filling duration (from anthesis to maturity or harvest)	DOUBLE	°C d	-	-	-
constant	cGS0	Minimum stomatal conductance when radiation and photosynthesis close to 0	DOUBLE	mol m-2 s-1	-	-	0.05
constant	cGSa1	Slope of photosynthesis and stomatal conductance model	DOUBLE	1	-	-	6.0
constant	cHeatStressTableFactor	Heat stress factor as function of temperature (c.f. TMPTB)	DOUBLEARRAY	1	-	-	0.5 0.5 1.0 1.0 0.5 0.0
constant	cHeatStressTableTemperature	Temperature (tmax - .25*(tmax-tmin)) for heat stress factor (c.f. TMPTB)	DOUBLEARRAY	°C	-	-	0.0 8.0 10.0 29.0 35.0 40.0
constant	cILAI	Initial value of LAI	DOUBLE	m2/m2	-	-	0.0
constant	cILPN	Initial value of number of leaf primordia	DOUBLE	1	-	-	0.0
constant	cIRRIG	Irrigation switch (1 irrigation on and 0 is off)	BOOLEAN	1	-	-	false
constant	cIWLVG	Initial value of dry weight of green leaf	DOUBLE	g/m2	-	-	0.0
constant	cIWRT	Initial value of dry weight of root	DOUBLE	g/m2	-	-	0.0
constant	cIWSO	Initial value of dry weight of organ	DOUBLE	g/m2	-	-	0.0
constant	cIWST	Initial value of dry weight of stem	DOUBLE	g/m2	-	-	0.0
constant	cJMUMOL	Conversion energy from radiation to mole photon	DOUBLE	mol MJ-1	-	-	4.56
constant	cKC25	CO2 turnover rate of Rubisco at 25°C (micromol CO2 g-1 Rubisco s-1)	DOUBLE	micromol g-1 s-1	-	-	2.0
constant	cKDF	Extinction coefficient of leaf for diffuse flux	DOUBLE	1	-	-	-
constant	cKMC25	Michaelis-Menten constant for CO2 at temperature 25°C	DOUBLE	μmol/mol	-	-	404.9
constant	cKMO25	Michaelis-Menten constant for O2 at temperature 25°C	DOUBLE	μmol/mol	-	-	278.4
constant	cLAICR	Critical leaf area index	DOUBLE	m2/m2	-	-	4.0
constant	cLAT	Latitude of the weather station	DOUBLE	°	-	-	0.0
constant	cLNUFLE	Leaf number in the main stem when flag leaf shown up	DOUBLE	1	-	-	7.0
constant	cLayerDepth	Thickness of the soil layers	DOUBLEARRAY	mm	-	-	-
constant	cLeavesPartitioningTableFraction	Fraction of total dry matter to leaves as function of DVS (c.f. PCLTB)	DOUBLEARRAY	1	-	-	0.325 0.325 0.48 0.48
constant	cLeavesPartitioningTableTsum	Tsum for fraction of total dry matter to leaves (c.f. PCLTB)	DOUBLEARRAY	°C d	-	-	0.0 100.0 265.0 670.0
constant	cMAINLV	Maintenance respiration coefficient of leaves, g CH2O g-1 DM d-1	DOUBLE	g/g	-	-	-
constant	cMAINRT	Maintenance respiration coefficient of root, g CH2O g-1 DM d-1	DOUBLE	g/g	-	-	-
constant	cMAINSO	Maintenance respiration coefficient of organ, g CH2O g-1 DM d-1	DOUBLE	g/g	-	-	-
constant	cMAINST	Maintenance respiration coefficient of stems, g CH2O g-1 DM d-1	DOUBLE	g/g	-	-	-
constant	cMODDTR	Factor to modify daily solar radiation	DOUBLE	1	-	-	1.0
constant	cMODTMP	Temperature increment to modify daily temperature	DOUBLE	°C	-	-	0.0
constant	cMaxFractionLeaves	Maximum partritiong ratio to leaf after two leaves	DOUBLE	1	-	-	0.46
constant	cMaxFractionRoots	Maximum partritiong ratio to root after emergency	DOUBLE	1	-	-	0.34
constant	cMaxOzoneSenescenceRate	Maximal senescence rate due to accumulated ozone	DOUBLE	d-1	-	-	0.05
constant	cMaxSLA	Maximum Specific leaf area	DOUBLE	m2/g	-	-	0.03
constant	cMaximalCROPHT	Maximal crop height	DOUBLE	m	-	-	1.0
constant	cMinSLA	Mininum Specific leaf area	DOUBLE	m2/g	-	-	0.017
constant	cMinimalTTANTH	Minimal value for thermal time when plant flowering (anthesis) occurs	DOUBLE	°C d	-	-	900.0
constant	cO2	Atmospheric O2 concentration	DOUBLE	μmol/mol	-	-	0.0
constant	cPCLTB	Fraction table for leaves	DOUBLEARRAY	1	-	-	-
constant	cPCRTB	Fraction table for roots	DOUBLEARRAY	1	-	-	-
constant	cPOTGGR	-	DOUBLE	1	-	-	-
constant	cParTsumLeaf	Thermal time determine the shape of partritiong curve for leaves	DOUBLE	°C d	-	-	406.0
constant	cParTsumRoot	Thermal time determine the shape of partritiong curve for root	DOUBLE	°C d	-	-	130.0
constant	cPhyllochroneIntercept	Intercept of relation between the mean thermal rate of leaf appearance ( °C day-1) and the rate of change of day length at crop emergence (h day-1)	DOUBLE	hour (°Cd)-1	-	-	0.0117
constant	cPhyllochroneSlope	slope of relation between the mean thermal rate of leaf appearance (°C day-1) and the rate of change of day length at crop emergence (h day-1)	DOUBLE	(°Cd)-1	-	-	0.024
constant	cPsiC	Psychromatic instrument constant	DOUBLE	kPa °C-1	-	-	0.066
constant	cQ10	Factor acounting for increase in maintance respiration with a 10°C rise temperature	DOUBLE	1	-	-	-
constant	cRGRL	Relative growth rate of leaf area during exponential growth	DOUBLE	(°C d)-1	-	-	-
constant	cRbound	Boundary layer resistance	DOUBLE	s m-1	-	-	7.0
constant	cRoCp	Volumetric heat capacity	DOUBLE	MJ m-3 °C-1	-	-	0.0012
constant	cRootsPartitioningTableFraction	Fraction of total dry matter to roots as function of DVS (c.f. PCRTB)	DOUBLEARRAY	1	-	-	0.5 0.5 0.35 0.35
constant	cRootsPartitioningTableTsum	Tsum for fraction of total dry matter to roots (c.f. PCRTB)	DOUBLEARRAY	°C d	-	-	0.0 100.0 265.0 670.0
constant	cSAINTC	Switch for rain interception calculation (0 no intercept, 1 intercept)	DOUBLE	1	-	-	0.0
constant	cSCP	Scattering coefficients of leaf for PAR	DOUBLE	1	-	-	0.2
constant	cSRNOFF	Switch for runoff calculation (0 no runoff, 1 runoff)	DOUBLE	1	-	-	0.0
constant	cTBASE	Base temperature	DOUBLE	°C	-	-	0.0
constant	cTMPTB	Table for heatstress factor	DOUBLEARRAY	1	-	-	-
constant	cTTSSE	Temperature sum from sowing to emegerce	DOUBLE	°C d	-	-	-
constant	cVCmaxUpperLimit	Upper limit value for maximum carboxylation rate	DOUBLE	micromol m-2 s-1	-	-	50.0
constant	cWCAD	Volumetric water content in each soil layer at dry air	DOUBLEARRAY	cm3/cm3	-	-	-
constant	cWCFC	Volumetric water content at field capacity in each soil layer	DOUBLEARRAY	cm3/cm3	-	-	-
constant	cWCLI	Initial value of water content in each layer WCL	DOUBLEARRAY	cm3/cm3	-	-	-
constant	cWCST	Volumetric water content at saturation in each soil layer	DOUBLEARRAY	cm3/cm3	-	-	-
constant	cWCWP	Volumetric water content at wilting point in each soil layer	DOUBLEARRAY	cm3/cm3	-	-	-
input	iCO2ADiurnal	Diurnal Atmospheric CO2 concentration - notice: will override variable cCO2A	DOUBLEARRAY	μmol/mol	-	-	-
input	iDoHarvest	-	BOOLEAN	-	-	-	false
input	iDoSow	-	BOOLEAN	-	-	-	false
input	iOZH	Hourly O3 concentration	DOUBLEARRAY	nmol mol-1	-	-	-
input	iPhotoresponseFactor	daily photoresponse factor	DOUBLE	1	0.0	1.0	1.0
input	iRAINDiurnal	Hourly precipitation	DOUBLEARRAY	mm	-	-	-
input	iRDDDiurnal	Hourly global radiation	DOUBLEARRAY	MJ m-2 hour-1	-	-	-
input	iRLV	Root length	DOUBLEARRAY	mm	-	-	-
input	iSTRESS	Transpiration reduction factor (ATRAN/PTRAN)	DOUBLE	1	-	-	1.0
input	iTMDiurnal	Hourly air temperature	DOUBLEARRAY	°C	-	-	-
input	iVPDiurnal	Hourly vapor actual pressure	DOUBLEARRAY	kPa	-	-	-
input	iVernalisationFactor	daily vernalisation factor	DOUBLE	1	0.0	1.0	1.0
input	iWCL	Volumetric in each soil layer	DOUBLEARRAY	cm3/cm3	-	-	-
input	iWNDiurnal	Hourly wind speed	DOUBLEARRAY	m s-1	-	-	-
state	LongO3DamageOnSenescence	Long-term damage factor for LAI before or after anthesis taking consideration of leaf age and phenology	DOUBLE	nmol m-2	-	-	0.0
state	sCOZIF	Accumulated ozone fluxes over canopy and time	DOUBLE	nmol m-2	-	-	0.0
state	sDVS	Development stage of crop (from 0 to 2)	DOUBLE	1	0.0	-	0.0
state	sLAI	Leaf area index	DOUBLE	m2/m2	-	-	0.0
state	sMSLN	Main stem leaf number	DOUBLE	1	-	-	0.0
state	sMSLPN	Main stem leaf perimodia number	DOUBLE	1	-	-	0.0
state	sPARSUM	Photosynthesis active radiation sum	DOUBLE	J/m2	-	-	0.0
state	sTSUM	Thermal time degree	DOUBLE	°C d	-	-	0.0
state	sTotalLAI	Total LAI (green LAI and dead LAI)	DOUBLE	m2/m2	-	-	0.0
state	sWLVG	Dry weight of green leaf	DOUBLE	g/m2	-	-	0.0
state	sWRT	Dry weight of root	DOUBLE	g/m2	-	-	0.0
state	sWSO	Dry weight of organ	DOUBLE	g/m2	-	-	0.0
state	sWST	Dry weight of stem	DOUBLE	g/m2	-	-	0.0
rate	rDVR	Rate of phenological development	DOUBLE	1	-	-	0.0
rate	rOZIF	Daily O3 influx	DOUBLE	nmol m-2 d-1	-	-	0.0
rate	rPAR	Instantaneous flux of photosynthesis active radiation	DOUBLE	J/(m2 s)	-	-	0.0
rate	rRLAI	Daily change of green leaf area LAI	DOUBLE	m2/(m2 d)	-	-	0.0
rate	rRLE	Rate change of leaf appearance	DOUBLE	d-1	-	-	0.0
rate	rRLPI	Rate change of leaf primordia	DOUBLE	d-1	-	-	0.0
rate	rRTSUM	Rate change of thermal time degree	DOUBLE	°C d	-	-	0.0
rate	rRWLVG	Daily change of dry weight of leaf /Dry matter growth rate of leaf	DOUBLE	g/m2	-	-	0.0
rate	rRWRT	Daily change of dry weight of root /Dry matter growth rate of root	DOUBLE	g/m2	-	-	0.0
rate	rRWSO	Daily change of dry weight of organ /Dry matter growth rate of organ	DOUBLE	g/m2	-	-	0.0
rate	rRWST	Daily change of dry weight of stem /Dry matter growth rate of stem	DOUBLE	g/m2	-	-	0.0
rate	rTotalLAIRate	Daily increase of LAI due to increase of green leaves	DOUBLE	m2/m2	-	-	0.0
out	ALB	Albedo, reflection coefficient for short-ware radiation	DOUBLE	1	-	-	0.0
out	ALBS	Albedo, reflection coefficient for soil surface	DOUBLE	1	-	-	0.0
out	AMAXshade	Light saturated leaf photosynthetic of shaded leaf	DOUBLE	g/(m2 s)	-	-	0.0
out	AMAXshadeDiurnal	Hourly light saturated photosynthesis rate of sunlit leave	DOUBLEARRAY	micromol m-2 s-1	-	-	-
out	AMAXsun	Light saturated leaf photosynthetic of sunlit leaf	DOUBLE	g/(m2 s)	-	-	0.0
out	AMAXsunDiurnal	Hourly light saturated photosynthesis rate of sunlit leave	DOUBLEARRAY	micromol m-2 s-1	-	-	-
out	AnthesisDOY	DOY of Anthesis	INT	1	1	366	-
out	AnthesisDate	Date of Anthesis	DATE	1	-	-	-
out	BBRAD	Black body radiation	DOUBLE	J/(m2 s)	-	-	0.0
out	CDSF1	Cumulative water stress factor reduces grain yield	DOUBLE	1	-	-	0.0
out	CO2Ishade	CO2 concentration of shaded leaf	DOUBLE	μmol/mol	-	-	0.0
out	CO2IshadeDiurnal	Hourly concentration of CO2 of shaded leave	DOUBLEARRAY		-	-	-
out	CO2Isun	CO2 concentration of sunlit leaf	DOUBLE	μmol/mol	-	-	0.0
out	CO2IsunDiurnal	Hourly concentration of CO2 of sunlit leave	DOUBLEARRAY		-	-	-
out	CROPHT	Crop height	DOUBLE	m	-	-	0.0
out	CUMREMOB	Cumulative mobilized assimilated from stem to grain	DOUBLE	g/m2	-	-	0.0
out	CropCycleCount	Number of finished crop cycles, incremented at harvest	INT	1	0	1000	0
out	DAE	Day after emergency	INT	d	-	-	0
out	DANTH	Day of anthesis	INT	d	-	-	0
out	DAVTMP	Daily average temperature	DOUBLE	°C	-	-	0.0
out	DFGROSshadeDiurnal	Hourly cumulative gross assimilation rate of the shaded leave	DOUBLEARRAY	micromol m-2 s-1	-	-	-
out	DFGROSsunDiurnal	Hourly cumulative gross assimilation rate of the sunlit leave	DOUBLEARRAY	micromol m-2 s-1	-	-	-
out	DFGROshade	Daily gross assimiliate of shaded leave	DOUBLE	micromol m-2 s-1	-	-	0.0
out	DFGROsun	Daily gross assimiliate of sun leave	DOUBLE	micromol m-2 s-1	-	-	0.0
out	DLAI	Death rate of leaf area	DOUBLE	m2/(m2 d)	-	-	0.0
out	DLEAVES	Death leaf rate due to aging and water stress	DOUBLE	d-1	-	-	0.0
out	DLV	Death rate of leaf in term of weigh	DOUBLE	g/(m2 d)	-	-	0.0
out	DOYEMactual	Day of year of crop emergency. Corresponds to cDOYEM if cDOYEM is given, otherwise to the DOY when iDoSow occurs.	INT	d	-	-	0
out	DRScropH2O	Daily canopy resistance to water vapor	DOUBLE	s m-1	-	-	0.0
out	DSF1	Water stress factor on leaf growth	DOUBLE	1	-	-	0.0
out	DTEFF	Daily effective temperature	DOUBLE	°C	-	-	0.0
out	DTGA	Daily total gross CO2 asimilation of the crop	DOUBLE	g/(m2 d)	-	-	0.0
out	DTGADiurnal	Hourly cumulative of gross assimilation rate of the crop canopy	DOUBLEARRAY	micromol m-2 s-1	-	-	-
out	DTR	Daily solar radiation =RDD*MODDRT	DOUBLE	J/(m2 d)	-	-	0.0
out	DVSFAC	http://www.wurvoc.org/vocabularies/om-1.8/gram_per_square_metre	DOUBLE	1	-	-	0.0
out	DgsCO2	Daily stomatal conductance to CO2	DOUBLE	mm/d	-	-	0.0
out	EFFshade	Quantum yield of shaded leaf	DOUBLE	g/MJ	-	-	0.0
out	EFFshadeDiurnal	Hourly quantum yield of shaded leaves	DOUBLEARRAY	g/MJ	-	-	-
out	EFFsun	Quantum yield of sunlit leaf	DOUBLE	g/MJ	-	-	0.0
out	EFFsunDiurnal	Hourly quantum yield of sunlit leaves	DOUBLEARRAY	g/MJ	-	-	-
out	EMERG	Parameter to indicate the emergency	INT	1	-	-	0
out	ET0	Potential evapotranspiration (ETD+ ETR)	DOUBLE	mm/d	-	-	0.0
out	ETD	Evapotranspiration due to radiation term	DOUBLE	mm/d	-	-	0.0
out	ETR	Evapotranspiration due to evaporative term (vpd)	DOUBLE	mm/d	-	-	0.0
out	EmergenceDOY	DOY of Emergence	INT	1	1	366	-
out	EmergenceDate	Date of Emergence	DATE	1	-	-	-
out	FCLEAR	Sky clearness function in calculation of net long-wave radiation	DOUBLE	J/(m2 s)	-	-	0.0
out	FGROSDiurnal	Hourly gross assimilation rate of the whole canopy	DOUBLEARRAY	micromol m-2 s-1	-	-	-
out	FGROSshadeDiurnal	Hourly gross assimilation rate of the shaded leave	DOUBLEARRAY	micromol m-2 s-1	-	-	-
out	FGROSsunDiurnal	Hourly gross assimilation rate of the sunlit leave	DOUBLEARRAY	micromol m-2 s-1	-	-	-
out	FSLLA	Fration of sunlit leaf area	DOUBLE	1	-	-	0.0
out	FSLLADiurnal	Hourly fraction of leaf area of sunlit and shaded leaves	DOUBLEARRAY		-	-	-
out	GLAI	Net growth rate of leaf area index	DOUBLE	m2/(m2 d)	-	-	0.0
out	GLV	Dry matter of growth rate of leaves	DOUBLE	g/(m2 d)	-	-	0.0
out	GRAINN	Total grain weight	DOUBLE	g/m2	-	-	0.0
out	GScropH2ODiurnal	Hourly canopy conductance to water vapor	DOUBLEARRAY	m s-1	-	-	-
out	GSshadeH2O	Stomatal conductance shaded leaf to H2O	DOUBLE	m s-1	-	-	0.0
out	GSshadeH2ODiurnal	Hourly stomatal conductance to water vapor of shaded leaves	DOUBLEARRAY	m s-1	-	-	-
out	GSsunH2O	Stomatal conductance sunlit leaf to H2O	DOUBLE	m s-1	-	-	0.0
out	GSsunH2ODiurnal	Hourly stomatal conductance to water vapor of sunlit leaves	DOUBLEARRAY	m s-1	-	-	-
out	GTOTAL	Daily total gross CH2O assimilation of the crop	DOUBLE	g/(m2 d)	-	-	0.0
out	HasEmerged	Has emerged	BOOLEAN	1	-	-	false
out	HasFlowered	Gas flowered	BOOLEAN	1	-	-	false
out	HasMatured	Is mature	BOOLEAN	1	-	-	false
out	INTRAD	Intercep PAR for radiation use efficiency calcuation	DOUBLE	MJ/(m2 d)	-	-	0.0
out	IsAnthesis	true if Anthesis date	BOOLEAN	1	-	-	false
out	IsEmergence	true if Emergence date	BOOLEAN	1	-	-	false
out	IsMaturity	true if maturity date	BOOLEAN	1	-	-	false
out	LAIANTH	Leaf area index at anthesis	DOUBLE		-	-	0.0
out	LongO3DamageOnPhotosyn	Long-term damage factor for photosynthesis (AMAX) before or after anthesis taking consideration of leaf age and phenology	DOUBLE	1	0.0	1.0	1.0
out	MAINT	Maintenance respiration after considration of effective temperature	DOUBLE	g/m2	-	-	0.0
out	MAINTS	Maintenance respiration after considration of effective temperature	DOUBLE	g/m2	-	-	0.0
out	MaturityDOY	DOY of Maturity	INT	1	1	366	-
out	MaturityDate	Date of Maturity	DATE	1	-	-	-
out	ONRAD	Net radiation (net short-ware radiation minus net long-wave radiation)	DOUBLE	J/(m2 s)	-	-	0.0
out	ORLOSS	Net long-wave radiation	DOUBLE	J/(m2 s)	-	-	0.0
out	OZIFDiurnal	instantaneous O3 influx to the leaf stomata	DOUBLEARRAY	nmol m-2 s-1	-	-	-
out	OZIFShadeDiurnal	instantaneous O3 influx to the shaded leaf stomata	DOUBLEARRAY	nmol m-2 s-1	-	-	-
out	OZIFSunDiurnal	instantaneous O3 influx to the sunlit leaf stomata	DOUBLEARRAY	nmol m-2 s-1	-	-	-
out	PARINT	Intercepted PAR	DOUBLE	MJ/(m2 d)	-	-	0.0
out	PCEDW	Partitioning fraction to storage organs	DOUBLE		-	-	0.0
out	PCEDWRescaled	partitioning fraction to storage organs? - rescaled to sum up to 1 for above ground fractions	DOUBLE	1	-	-	0.0
out	PCLDW	Partitioning fraction to leaves	DOUBLE	1	-	-	0.0
out	PCLDWRescaled	partitioning fraction to leaves? - rescaled to sum up to 1 for above ground fractions	DOUBLE	1	-	-	0.0
out	PCRDW	Partitioning fraction to roots	DOUBLE	1	-	-	0.0
out	PCSDW	Partitioning fraction to stems	DOUBLE	1	-	-	0.0
out	PCSDWRescaled	partitioning fraction to stems? - rescaled to sum up to 1 for above ground fractions	DOUBLE	1	-	-	0.0
out	PHEADW	Weight of shoot at emgerce, at flag leaf emergence, and at anthesis	DOUBLEARRAY	g/m2	-	-	-
out	PHEDAE	Days at emgerce, at flag leaf emergence, and at anthesis	INTARRAY	d	-	-	0 0 0
out	PHOTMP	Daily average temperature after modifying temperature factor (MODTMP)	DOUBLE	°C	-	-	0.0
out	PHY	Phylochron	DOUBLE	°C d	-	-	0.0
out	PRWSO	Assimilate source for grain growth	DOUBLE	m2/m2	-	-	0.0
out	PotentialDRScropH2O	Daily canopy resistance to water vapor (no water stress)	DOUBLE	s m-1	-	-	0.0
out	RAIN	Daily precipitation	DOUBLE	mm/d	-	-	0.0
out	RCPHOE	Rate change of photoperiod at emergence dates	DOUBLE	h	-	-	0.0
out	RDD	Daily global radiation	DOUBLE	°C	-	-	0.0
out	RDRSH	Relative death rate due to self-shading at high LAI	DOUBLE	d-1	-	-	-
out	REMOB	Mobilization of assimilate from stem to the grain	DOUBLE	g/m2	-	-	0.0
out	RNS	Net short-wave radiation	DOUBLE	J/(m2 s)	-	-	0.0
out	RRATIO	Ratio of root to total root+shoot dry matter	DOUBLE	1	-	-	0.0
out	RSINK	Sink for grain growth	DOUBLE	g/m2	-	-	0.0
out	RScropH2ODiurnal	Hourly canopy resistance to water vapor	DOUBLEARRAY	s m-1	-	-	-
out	RUE	Radiation use efficiency	DOUBLE	g/MJ	-	-	0.0
out	SDWANT	Weight of stem at anthesis	DOUBLE	g/m2	-	-	0.0
out	SLA	Specific leaf area	DOUBLE	m2/g	-	-	0.0
out	SVAP	Saturated vapor pressure	DOUBLE	kPa	-	-	0.0
out	SWITCH	The switch of phenology stage	INT	1	-	-	0
out	ShortO3DamageOnPhotosynShadeDiurnal	Short-term damage factor for photosynthesis on shaded leaves	DOUBLEARRAY	1	0.0	1.0	-
out	ShortO3DamageOnPhotosynSunDiurnal	Short-term damage factor for photosynthesis on sunlit leaves	DOUBLEARRAY	1	0.0	1.0	-
out	TDW	total dry matter (= root + shoot)	DOUBLE	g/m2	-	-	0.0
out	TEFF	Effective temperature for growth respiration	DOUBLE	°C	-	-	0.0
out	TFAC	Temperature factor reduces grain yield	DOUBLE	1	-	-	0.0
out	TMMN	Daily minimum temperature	DOUBLE	°C	-	-	0.0
out	TMMX	Daily maximum temperature	DOUBLE	°C	-	-	0.0
out	TRANSLOC	Translocation of assimilation rates into the roots due to the lack of sink	DOUBLE	g/m2	-	-	0.0
out	TSUMend	Thermal time at end of growing season	DOUBLE	°C d	-	-	0.0
out	TTANTH	Thermal time from sowing to anthesis	DOUBLE	°C d	-	-	0.0
out	TTFLE	Thermal time from sowing to the appearance of flag leave	DOUBLE	°C d	-	-	0.0
out	TTMAT	Thermal time from sowing to maturity	DOUBLE	°C d	-	-	0.0
out	TWPAW	Daily water stress index calculated based on soil water content	DOUBLE	1	-	-	0.0
out	VP	Actual vapour pressure	DOUBLE	kPa	-	-	0.0
out	VPD	Vapor pressure deficit of the air	DOUBLE	kPa	-	-	0.0
out	WN	Wind speed	DOUBLE	m s-1	-	-	-
out	WSHOOT	Weight of shoot (stem+leaf+storage organ)	DOUBLE	g/m2	-	-	0.0
out	WithCrop	Crop is present	BOOLEAN	1	-	-	false
out	rDeadLeavesOzoneRate	daily dead leaves due to accumulated O3	DOUBLE	g/(m2 d)	-	-	0.0
out	sDeadLeavesOzone	total dead leaves due to accumulated o3	DOUBLE	g/m2	-	-	0.0

Nested Class Summary

Nested classes/interfaces inherited from class net.simplace.sim.model.FWSimComponent

net.simplace.sim.model.FWSimComponent.TEST_STATE

Field Summary

Fields inherited from class net.simplace.sim.model.FWSimComponent

iFieldMap, iFrequence, iInputMap, iJexlRule, iMasterComponentGroup, iName, iOrderNumber, isComponentGroup, iSimComponentElement, iSimModel, iVarMap

Constructor Summary

Constructors

Constructor	Description
LintulCCDiurnalCropOzone()	Empty constructor used by class.forName()
LintulCCDiurnalCropOzone(String aName, HashMap<String,net.simplace.sim.util.FWSimVariable<?>> aFieldMap, HashMap<String,String> aInputMap, org.jdom2.Element aSimComponentElement, net.simplace.sim.util.FWSimVarMap aVarMap, int aOrderNumber)

Method Summary

Modifier and Type	Method	Description
protected net.simplace.sim.model.FWSimComponent	clone(net.simplace.sim.util.FWSimVarMap aVarMap)
HashMap<String,net.simplace.sim.util.FWSimVariable<?>>	createVariables()	Create the FWSimVariables as interface for this SimComponent
HashMap<String,net.simplace.sim.util.FWSimVariable<?>>	fillTestVariables(int aParamIndex, net.simplace.sim.model.FWSimComponent.TEST_STATE aDefineOrCheck)	called for single component test to check the components algorithm.
void	init()
void	initVariables()
void	process()
void	resetOnHarvest()

Methods inherited from class net.simplace.sim.model.FWSimComponent

addVariable, bind, checkCondition, createSimComponent, createSimComponent, createSimComponent, createSimComponent, doProcess, getConstantVariables, getContentType, getCreateFormXML, getDescription, getEditFormXML, getFieldMap, getFrequence, getFrequenceRuleScript, getInputs, getInputVariables, getMasterComponentGroup, getName, getOrderNumber, getOutputVariables, getVariable, getVariableField, getVarMap, initialize, isConditionCheck, isVariableAvailable, performLinks, performLinks, readInputs, removeVariable, reset, runComponentTest, setVariablesDefault, toComponentLinkingXML, toDocXML, toGroupXML, toOutputDefinitionXML, toResourcesDataXML, toResourcesDefinitionXML, toString, toXML, writeVarInfos

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

LintulCCDiurnalCropOzone

public LintulCCDiurnalCropOzone(String aName,
 HashMap<String,net.simplace.sim.util.FWSimVariable<?>> aFieldMap,
 HashMap<String,String> aInputMap,
 org.jdom2.Element aSimComponentElement,
 net.simplace.sim.util.FWSimVarMap aVarMap,
 int aOrderNumber)

Parameters:

aName -

aFieldMap -

aInputMap -

aSimComponentElement -

aVarMap -

aOrderNumber -

LintulCCDiurnalCropOzone

public LintulCCDiurnalCropOzone()

Empty constructor used by class.forName()

Method Details

createVariables

public HashMap<String,net.simplace.sim.util.FWSimVariable<?>> createVariables()

Create the FWSimVariables as interface for this SimComponent

Specified by:

createVariables in interface net.simplace.sim.util.FWSimFieldContainer

Specified by:

createVariables in class net.simplace.sim.model.FWSimComponent

See Also:

• net.simplace.simulation.model.FWSimComponent#createVariables()

init

public void init()

Specified by:

init in class net.simplace.sim.model.FWSimComponent

initVariables

public void initVariables()

resetOnHarvest

public void resetOnHarvest()

process

public void process()

Specified by:

process in class net.simplace.sim.model.FWSimComponent

fillTestVariables

public HashMap<String,net.simplace.sim.util.FWSimVariable<?>> fillTestVariables(int aParamIndex,
 net.simplace.sim.model.FWSimComponent.TEST_STATE aDefineOrCheck)

called for single component test to check the components algorithm.

Specified by:

fillTestVariables in class net.simplace.sim.model.FWSimComponent

See Also:

• net.simplace.sim.util.FWSimFieldContainer#fillTestVariables(int aParamIndex, TEST_STATE aDefineOrCheck)

clone

protected net.simplace.sim.model.FWSimComponent clone(net.simplace.sim.util.FWSimVarMap aVarMap)

Specified by:

clone in class net.simplace.sim.model.FWSimComponent

See Also:

• net.simplace.simulation.model.FWSimComponent#clone(net.simplace.simulation.util.FWSimVarMap)